SCUBA

RPN2 — Ribophorin II

RPN2 belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

RPN2's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsOxidative phosphorylation
Mitochondrial & OxPhos
ACADVL, CHMP1A, COX14, EIF2AK1, EML2, ETFA, GPR108, NDUFA8 +12 moreView in SCUBA
EndothelialER-Golgi Trafficking
Protein processing & ER
ARPC1A, CCT8, FIBP, GDI2, GGCT, LMAN2, MAP2K2, MRPS16 +10 moreView in SCUBA
FibroblastsER Protein Folding
Housekeeping
AHCYL1, CANX, CSNK1A1, HNRNPK, HSP90B1, JAK1, KDELR1, KTN1 +10 moreView in SCUBA
Gamma-delta T cellsImmune Synapse Cytoskeleton
Cytoskeletal
ARHGAP4, ARHGAP45, ATP2A3, CD48, DDOST, ICAM3, IL32, LAPTM5 +8 more
Goblet cellsER Protein Translocation
Protein processing & ER
DNAJC3, LMAN1, PDIA6, SPCS2, SPCS3, SSR1, TMED10, TMED2View in SCUBA
Lymphatic endothelialER-Lysosomal Processing
Protein processing & ER
BCAP31, CTSD, DHRS7, EHD2, GRN, LAMP1, OS9, PSAP +2 moreView in SCUBA
MacrophagesER Stress UPR
Stress
ANKRD9, APEH, ARMCX6, BET1L, CALR, CCDC107, COPS2, DNAJB11 +20 moreView in SCUBA
Mucosal-associated invariant T cellER Protein Glycosylation
Protein processing & ER
ANAPC5, HNRNPM, LMAN2, PDAP1, PKM, PRKCSH, RHOA, RPN1 +3 more
NeutrophilsTranslation Initiation
Housekeeping
EIF1AX, EIF3A, HNRNPA1, NAP1L1, NCL, PPIA, PTMA, SET +1 more
Smooth muscle cellsLysosomal-secretory processing
Protein processing & ER
BZW2, COPZ1, CTSL, LAMP1, PIGT, PLOD2, PRMT2, RGS9 +5 moreView in SCUBA

About the gene

SynonymsRIBIIR, RPN-II, RPNII, SWP1
Chromosome20: 37178410-37241619
Predicted locationIntracellular, Membrane
Essential geneYes
Protein classEssential proteins, Metabolic proteins, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters

Function

Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.