SCUBA

CD48 — CD48 molecule

CD48 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CD48's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsMHC-I Antigen Presentation
Anti-viral
B2M, BANK1, CYSLTR1, HLA-A, HLA-B, HLA-C, HLA-E, HLA-F +1 moreView in SCUBA
CD4⁺ T cellsRibosomal proteins
Housekeeping
ESD, PARP11, RPLP0, RPLP1, RPS19, TPT1, VEGFBView in SCUBA
CD8⁺ T cellsNaive/Memory CD8
T cell maturation
C1orf162, CD55, EEF1B2, GPR155, IL7R, MATK, MYBL1, NACA +3 moreView in SCUBA
Gamma-delta T cellsImmune Synapse Cytoskeleton
Cytoskeletal
ARHGAP4, ARHGAP45, ATP2A3, DDOST, ICAM3, IL32, LAPTM5, LTB4R2 +8 more
Innate lymphoid cellsNK Receptor Signaling
Cytotoxicity
B2M, CLEC2B, DCK, FCER1G, FKBP11, GPR108, HLA-A, HLA-B +12 moreView in SCUBA
MacrophagesIFN-gamma Response
Inflammatory
ANKRD22, APOL2, ATF5, ATP13A1, CD274, CD300LF, CD40, CTSH +21 moreView in SCUBA
MonocytesInflammasome Activation
Innate immunity
ATG3, CARD16, CASP1, CASP4, CD53, KYNU, MTHFD2, PSMA4 +1 moreView in SCUBA
Mucosal-associated invariant T cellTGF-beta Response
Immune regulation
ABCA1, ARL4C, ARRDC2, DDX47, DNLZ, ERGIC1, FMNL1, HYPK +21 more
Natural Killer cellsNK Cytotoxic Signaling
Cytotoxicity
APOBEC3G, B2M, CALM1, GLIPR2, HCST, MYL12A, TMSB10, TRGC1 +1 moreView in SCUBA

About the gene

SynonymsBCM1, BLAST, hCD48, mCD48, SLAMF2
Chromosome1: 160678746-160711831
Predicted locationMembrane, Secreted
Essential geneNo
Protein classCD markers, Plasma proteins, Predicted membrane proteins, Predicted secreted proteins, Transporters

Function

Glycosylphosphatidylinositol (GPI)-anchored cell surface glycoprotein that interacts via its N-terminal immunoglobulin domain with cell surface receptors including CD244/2B4 or CD2 to regulate immune cell function and activation. Participates in T-cell signaling transduction by associating with CD2 and efficiently bringing the Src family protein kinase LCK and LAT to the TCR/CD3 complex. In turn, promotes LCK phosphorylation and subsequent activation. Induces the phosphorylation of the cytoplasmic immunoreceptortyrosine switch motifs (ITSMs) of CD244 initiating a series of signaling events that leads to the generation of the immunological synapse and the directed release of cytolytic granules containing perforin and granzymes by T-lymphocytes and NK- cells.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.