SCUBA

ACTN4 — Actinin alpha 4

ACTN4 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ACTN4's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsInterferon response
Anti-viral
CAPZA1, CHMP4A, CHMP5, EFHD2, IL12RB1, LSP1, PARP14, PIN1 +7 moreView in SCUBA
CD8⁺ T cellsTCR Proximal Signaling
TCR Signaling
CD3G, CMIP, GALNT1, IVNS1ABP, LCP2, MSN, PTPN22, PTPRA +3 moreView in SCUBA
EndothelialEndothelial Angiogenic Identity
Endothelial cell development
ADGRL4, APBB2, CAVIN1, CD93, CLEC14A, CLIC4, ESAM, MYH9 +5 moreView in SCUBA
Gamma-delta T cellsChromatin Remodeling
DNA/chromatin regulation
ANP32E, AP2B1, CCDC82, EIF2B1, EXOSC10, FAR1, FLII, HCFC1 +17 more
Goblet cellsActin Cytoskeletal Remodeling
Cytoskeletal
ACTR3, BHLHE40, CAP1, FHL2, KCNK1, LRP10, SDCBP, SLC7A11 +3 moreView in SCUBA
Innate lymphoid cellsActin Cytoskeleton Dynamics
Cytoskeleton & motility
ALDH9A1, APBB1IP, ARHGAP10, CDC37, CXXC5, FAM136A, FERMT3, FIP1L1 +26 moreView in SCUBA
MacrophagesPhagocytic Endolysosomal
Lysosomal & pahgocytosis
ABHD2, AP3S1, ARF6, ATP6V1B2, CD151, CERS2, CNIH1, CPD +27 moreView in SCUBA
Mucosal-associated invariant T cellmRNA Processing Translation
RNA processing & translation
CDC42SE1, CSDE1, DDX5, EIF4G1, GDI1, HNRNPU, MSN, NCL +7 more
Smooth muscle cellsActin Cytoskeletal Scaffold
Cytoskeletal
ATP2B4, ATRX, DDX5, DLGAP4, EIF4G2, FAT1, GNAI2, JAK1 +13 moreView in SCUBA

About the gene

SynonymsFSGS1
Chromosome19: 38647649-38731589
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionActin-binding
Biological processProtein transport, Transport

Function

F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein (Probable). Probably involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation. Involved in tight junction assembly in epithelial cells probably through interaction with MICALL2. Links MICALL2 to the actin cytoskeleton and recruits it to the tight junctions (By similarity). May also function as a transcriptional coactivator, stimulating transcription mediated by the nuclear hormone receptors PPARG and RARA. Association with IGSF8 regulates the immune synapse formation and is required for efficient T-cell activation.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.