SCUBA

CLK1 — CDC like kinase 1

CLK1 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CLK1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsmRNA Splicing
RNA processing
AFF4, ARL6IP1, CALR, CCNL1, DDX3X, DDX5, EIF4A2, HSPA5 +7 moreView in SCUBA
CD4⁺ T cellsmRNA Splicing Factors
RNA processing
ARGLU1, CDKN2D, ERO1B, FUS, GLS, HNRNPA2B1, ID1, MAT2A +8 moreView in SCUBA
CD8⁺ T cellsImmediate Early Response
Stress
ARRDC3, ATF3, EIF4A2, EIF5, GADD45B, IER5, JUN, KLF6 +6 moreView in SCUBA
FibroblastsHeat Shock Response
Stress
BCLAF1, CCNL1, CHORDC1, FAM133B, GADD45B, HSPH1, IER5, MIDN +5 moreView in SCUBA
Gamma-delta T cellsPre-mRNA Splicing
RNA processing & translation
BCLAF1, CENPC, CNOT1, COG3, COPS2, DDX24, DDX3X, EPC1 +11 more
Innate lymphoid cellsNK Cytotoxic Regulation
Cytotoxicity
ARHGAP30, BIN2, CAPN12, CHD9, CTSC, CYB5B, DDX27, DNMT1 +29 moreView in SCUBA
Lymphatic endothelialNotch TGF-β Endothelial
endothelial development
ARF6, ARL4C, C16orf87, CCNL1, DEDD2, ELOC, GPBP1, HEY1 +11 moreView in SCUBA
MacrophagesSplicing Factor Regulation
Housekeeping
ARAP1, CCNL1, CELF1, FAM53C, IFRD1, INPPL1, KIDINS220, MAN2C1 +12 moreView in SCUBA
Mucosal-associated invariant T cellSplicing Regulation
RNA processing & translation
AREG, ARHGAP9, AZIN1, CCNH, DDX24, DNAJB6, IL23R, NEU1 +9 more

About the gene

Chromosome2: 200853009-200864691
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classEnzymes, Predicted intracellular proteins, Predicted membrane proteins
Molecular functionKinase, Serine/threonine-protein kinase, Transferase, Tyrosine-protein kinase

Function

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine- rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.