SCUBA

UBE2B — Ubiquitin conjugating enzyme E2 B

UBE2B belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

UBE2B's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNF-kB signaling
BCR/AP1/NFKb pathway
ARIH1, BACH1, BRAF, HERPUD1, MTMR6, RAB21, RASGEF1B, REL +5 moreView in SCUBA
CD4⁺ T cellsmRNA stability regulation
Immune regulation
APLP2, ARID5B, CARHSP1, GK, GLCCI1, GRAMD4, HIVEP1, METTL8 +12 moreView in SCUBA
Glial cellsAHR-Cytokine Activation
Activation
AHR, BHLHE40, CAVIN1, CDH19, HNRNPA3, IL6ST, ITPR1, RBM39 +1 moreView in SCUBA
Lymphatic endothelialRNA Protein Homeostasis
RNA processing & translation
ADRM1, BAG1, COPRS, ILF2, RAB32, RAN, RBM8A, SLC25A5 +2 moreView in SCUBA
MacrophagesRAS-MAPK Signaling
Housekeeping
ARF4, ATG12, CAMTA1, CDC37, CHMP4B, ETFA, GLA, HMGA1 +26 moreView in SCUBA
Mucosal-associated invariant T cellRNA Splicing m6A
RNA processing & translation
ARF1, ARF6, ATP5F1B, CIRBP, CORO7, EIF1B, EIF5A, EMD +15 more
Natural Killer cellsNRF2 Stress Response
Stress
C1orf56, CNOT6L, CWC25, DDX18, FAM133B, JOSD1, KMT2E, NFE2L2 +2 moreView in SCUBA
NeutrophilsMyeloid Inflammatory Activation
Inflammatory
AQP9, CPD, FPR1, ITGAX, LITAF, MXD1, NABP1, NAMPT +5 more
Smooth muscle cellsAtrophy Proteolysis Program
Stress
ARL6IP5, CTDSP2, FBXO32, FOXP1, GLUL, SERINC3, SQSTM1View in SCUBA

About the gene

SynonymsHHR6B, RAD6B, UBC2
Chromosome5: 134371184-134392108
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Metabolic proteins, Predicted intracellular proteins
Molecular functionTransferase
Biological processDNA damage, DNA repair, Ubl conjugation pathway

Function

E2 ubiquitin-conjugating enzyme that accepts ubiquitin from the ubiquitin-activating enzyme E1 and transfers it to a E3 ubiquitin- protein ligase. In vitro catalyzes 'Lys-11'-, as well as 'Lys-48'- and 'Lys-63'-linked polyubiquitination. Together with the E3 enzyme BRE1 (RNF20 and/or RNF40), plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B at 'Lys-120' to form H2BK120ub1. H2BK120ub1 gives a specific tag for epigenetic transcriptional activation, elongation by RNA polymerase II, telomeric silencing, and is also a prerequisite for H3K4me and H3K79me formation. May play a role in DNA repair. Associates to the E3 ligase RAD18 to form the UBE2B-RAD18 ubiquitin ligase complex involved in mono-ubiquitination of DNA-associated PCNA on 'Lys-164'. In association with the E3 enzyme UBR4, is involved in N-end rule-dependent protein degradation. May be involved in neurite outgrowth (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.