SCUBA

ILF2 — Interleukin enhancer binding factor 2

ILF2 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ILF2's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsChaperonin Protein Folding
Protein processing & ER
BANF1, CCT2, CCT3, CCT4, CCT5, CCT6A, EIF2S1, MRPL14 +5 moreView in SCUBA
CD4⁺ T cellsRNA processing splicing
RNA processing
BUD31, DNAJC8, EDF1, EIF2S1, GTF3C6, HPRT1, LAMTOR5, MIIP +11 moreView in SCUBA
CD8⁺ T cellsMetabolic Housekeeping
Housekeeping
COX17, DAZAP1, EIF4E, MRPL51, NDUFA2, SSNA1, TADA3, TPM4View in SCUBA
EndothelialNuclear Transport
Housekeeping
ALYREF, BANF1, CNIH4, COX8A, HAUS1, HMGN1, LSM5, MRPL51 +8 moreView in SCUBA
Gamma-delta T cellssnRNP Splicing
RNA processing & translation
CHCHD2, DAZAP1, GAPDH, GIT1, GUK1, HDGF, LAMTOR5, MRPS15 +16 more
Goblet cellsRNA Decay Processing
RNA processing & translation
CCNI, RBPJ, RSL24D1, SRSF3, SYNCRIP, UBE2I, UBE2R2, XRCC5 +2 moreView in SCUBA
Hematopoietic progenitor cellsProteostasis & OxPhos
Mitochondrial & OxPhos
COX5A, EIF5A, HNRNPF, HSPA8, MRPS34, NDUFB6, PSMB5, SLBP
Innate lymphoid cellsMixed Proteostasis Metabolism
Metabolism
ADRM1, ANXA11, ATP6V0B, CISD2, COX17, DNAJC8, DR1, EIF3I +18 moreView in SCUBA
Lymphatic endothelialRNA Protein Homeostasis
RNA processing & translation
ADRM1, BAG1, COPRS, RAB32, RAN, RBM8A, SLC25A5, SNRPB +2 moreView in SCUBA
MacrophagesReplication Chromatin Assembly
Cell cycle
ANP32B, CBX3, CDK4, COPS3, DEK, DNMT1, EMC8, EXOSC8 +22 moreView in SCUBA
Mucosal-associated invariant T cellTGF-beta Response
Immune regulation
ABCA1, ARL4C, ARRDC2, CD48, DDX47, DNLZ, ERGIC1, FMNL1 +21 more
Smooth muscle cellsMicrotubule biogenesis
Cytoskeletal
ACOT7, FBXL22, LIMS2, NUCB2, PGRMC1, PHGDH, PPP2R1A, TBCB +3 moreView in SCUBA

About the gene

SynonymsNF45
Chromosome1: 153661788-153671028
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Function

Chromatin-interacting protein that forms a stable heterodimer with interleukin enhancer-binding factor 3/ILF3 and plays a role in several biological processes including transcription, innate immunity or cell growth. Essential for the efficient reshuttling of ILF3 (isoform 1 and isoform 2) into the nucleus. Together with ILF3, forms an RNA-binding complex that is required for mitotic progression and cytokinesis by regulating the expression of a cluster of mitotic genes. Mechanistically, competes with STAU1/STAU2-mediated mRNA decay. Also plays a role in the inhibition of various viruses including Japanese encephalitis virus or enterovirus 71. (Microbial infection) Plays a positive role in HIV-1 virus production by binding to and thereby stabilizing HIV-1 RNA, together with ILF3

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.