SCUBA

SERINC3 — Serine incorporator 3

SERINC3 belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SERINC3's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsImmediate early response
BCR/AP1/NFKb pathway
CCNT1, CREM, HES4, JMY, JOSD1, KDM4B, NR4A3, PCNX4 +7 moreView in SCUBA
CD4⁺ T cellsT-cell costimulation
TCR/AP1/NFKb pathway
ASH1L, BOD1L1, CCM2, CCR4, CD28, CREBRF, DDX27, ERBIN +10 moreView in SCUBA
EndothelialVascular EC Identity
Endothelial cell development
AMOTL1, ARFGEF3, ATN1, CAMK1D, CASP10, CCNY, CFLAR, F11R +13 moreView in SCUBA
Gamma-delta T cellsInterferon Stimulated Genes
Inflammation
AATF, ACSL5, ACTR10, AGL, DDX60, DTX3L, HCLS1, HIF1AN +14 more
Innate lymphoid cellsILC Identity Program
Differentiation
AHR, APOL4, ARHGEF12, BLVRA, CD300LF, CDK2AP2, CEP83, COL4A4 +29 moreView in SCUBA
Lymphatic endothelialInnate Immune Activation
Immune regulation
CD46, CLTC, CRIM1, EIF2AK2, ENSA, FEZ2, GSN, PDLIM3 +9 moreView in SCUBA
MacrophagesER Membrane Homeostasis
Housekeeping
ATP6V1A, BNIP2, CANX, CAPZA1, CD164, CMTM6, COPB1, EXOC5 +18 moreView in SCUBA
Mucosal-associated invariant T cellT cell Homeostasis
T cell maturation
APOL6, CD40LG, CNDP2, FAM118A, FCMR, GPR171, IFIH1, IL7R +19 more
PericytesGolgi Vesicular Trafficking
Vesicular traficking
APP, CLIC4, CTNNA1, EMP2, GNAS, PAK2, PTTG1IP, TGOLN2 +1 moreView in SCUBA
Smooth muscle cellsAtrophy Proteolysis Program
Stress
ARL6IP5, CTDSP2, FBXO32, FOXP1, GLUL, SQSTM1, UBE2BView in SCUBA

About the gene

SynonymsAIGP1, DIFF33, SBBI99, TDE, TDE1, TMS-1
Chromosome20: 44496221-44522085
Predicted locationMembrane
Essential geneNo
Protein classPredicted membrane proteins, Transporters
Biological processAntiviral defense, Host-virus interaction, Immunity, Innate immunity

Function

Restriction factor required to restrict infectivity of lentiviruses, such as HIV-1: acts by inhibiting an early step of viral infection. Impairs the penetration of the viral particle into the cytoplasm. Non-ATP-dependent, non- specific lipid transporter for phosphatidylserine, phosphatidylcholine, and phosphatidylethanolamine. Functions as a scramblase that flips lipids in both directions across the membrane. Phospholipid scrambling results in HIV-1 surface exposure of phosphatidylserine and loss of membrane asymmetry, which leads to changes in HIV-1 Env conformation and loss of infectivity.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.