SCUBA

SQSTM1 — Sequestosome 1

SQSTM1 belongs to a gene co-expression module in 14 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SQSTM1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsImmediate Early NFkB
BCR/AP1/NFKb pathway
ARL5B, CDKN1A, CSRNP1, DUSP2, EGR1, EGR3, IER2, NFKBIA +3 moreView in SCUBA
CD4⁺ T cellsTNF/NF-kB activation
TCR/AP1/NFKb pathway
BIRC3, DUSP10, GABARAPL1, HNRNPC, LUZP1, MDFIC, NSUN6, PMAIP1 +6 moreView in SCUBA
CD8⁺ T cellsBATF-driven Activation
T cell maturation
ARL6IP5, BATF, CD82, IL2RG, LAMTOR5, SCAMP2, SH2D2A, SYNGR2 +2 moreView in SCUBA
EndothelialNF-κB Activation
Inflammation
C2CD4B, HSPA6, ICAM5, IER3, MAP3K8, NFKBIA, NFKBID, PMAIP1 +5 moreView in SCUBA
FibroblastsIntegrated Stress Response
Stress
ATF4, BAIAP2, DNAJB6, EIF4A3, EIF5, FSCN1, HSP90AB1, HSPD1 +9 moreView in SCUBA
Gamma-delta T cellsAutophagy Stress Response
Stress
AKIRIN1, BRD9, CDKN2AIP, DHX36, DNAJB2, FOXO3, MLXIP, ODF2L +11 more
Glial cellsProteostasis Stress Response
Stress
DNAJB6, EIF5, HNRNPA0, NUDT4, RSRC2, TRIM8, UBE2D3, ZC3HAV1View in SCUBA
Goblet cellsStress Survival Response
Stress
EPHA2, ERRFI1, EZR, KLF6, LDLR, LMNA, MCL1, NEDD9 +3 moreView in SCUBA
Innate lymphoid cellsNF-κB Inflammatory Activation
Inflammation
CDKN1A, CSRNP1, DUSP1, DUSP2, DUSP6, ELL2, EZR, FOS +26 moreView in SCUBA
Lymphatic endothelialNF-κB Autophagy Regulation
Immune regulation
CLIC2, GABARAPL1, LGMN, NFKBIB, OSER1, PRRG4, RELB, RNF114 +3 moreView in SCUBA
MacrophagesLipid-Sensing Transcriptional
Lipid metabolism
ANKLE2, BAIAP2, C19orf25, C1orf52, COX19, CWC25, DEDD2, DNTTIP2 +29 moreView in SCUBA
Mucosal-associated invariant T cellNuclear Receptor Chromatin
DNA/chromatin regulation
CD8A, DDX21, DDX39A, FBRS, GNL1, NR1H2, PHF1, TRABD +1 more
Natural Killer cellsAutophagy-Inflammation Stress
Stress
BCL2A1, DDIT3, ICAM1, IFFO2, JMJD6, KLF10, MAP1LC3B, MKNK2 +3 moreView in SCUBA
Smooth muscle cellsAtrophy Proteolysis Program
Stress
ARL6IP5, CTDSP2, FBXO32, FOXP1, GLUL, SERINC3, UBE2BView in SCUBA

About the gene

SynonymsA170, OSIL, p60, p62, p62B, PDB3
Chromosome5: 179806398-179838078
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Predicted intracellular proteins
Biological processApoptosis, Autophagy, Differentiation, Immunity

Function

Molecular adapter required for selective macroautophagy (aggrephagy) by acting as a bridge between polyubiquitinated proteins and autophagosomes. Promotes the recruitment of ubiquitinated cargo proteins to autophagosomes via multiple domains that bridge proteins and organelles in different steps. SQSTM1 first mediates the assembly and removal of ubiquitinated proteins by undergoing liquid-liquid phase separation upon binding to ubiquitinated proteins via its UBA domain, leading to the formation of insoluble cytoplasmic inclusions, known as p62 bodies. SQSTM1 then interacts with ATG8 family proteins on autophagosomes via its LIR motif, leading to p62 body recruitment to autophagosomes, followed by autophagic clearance of ubiquitinated proteins. SQSTM1 is itself degraded along with its ubiquitinated cargos. Also required to recruit ubiquitinated proteins to PML bodies in the nucleus. Also involved in autophagy of peroxisomes (pexophagy) in response to reactive oxygen species (ROS) by acting as a bridge between ubiquitinated PEX5 receptor and autophagosomes. Acts as an activator of the NFE2L2/NRF2 pathway via interaction with KEAP1: interaction inactivates the BCR(KEAP1) complex by sequestering the complex in inclusion bodies, promoting nuclear accumulation of NFE2L2/NRF2 and subsequent expression of cytoprotective genes. Promotes relocalization of 'Lys-63'-linked ubiquitinated STING1 to autophagosomes. Involved in endosome organization by retaining vesicles in the perinuclear cloud: following ubiquitination by RNF26, attracts specific vesicle-associated adapters, forming a molecular bridge that restrains cognate vesicles in the perinuclear region and organizes the endosomal pathway for efficient cargo transport. Sequesters tensin TNS2 into cytoplasmic puncta, promoting TNS2 ubiquitination and proteasomal degradation. May regulate the activation of NFKB1 by TNF-alpha, nerve growth factor (NGF) and interleukin-1. May play a role in titin/TTN downstream signaling in muscle cells. Adapter that mediates the interaction between TRAF6 and CYLD (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.