SCUBA

BTF3 — Basic transcription factor 3

BTF3 belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

BTF3's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsOxidative Phosphorylation
Mitochondrial & OxPhos
COX4I1, COX7C, EIF3H, EIF3K, HINT1, RPL36AL, RPL4, RPLP0 +2 moreView in SCUBA
CD4⁺ T cellsTranslation machinery
Housekeeping
ATP5PO, COX4I1, EEF2, EIF3D, EIF3G, EIF3K, MZT2B, RACK1 +2 moreView in SCUBA
CD8⁺ T cellsRibosome Biogenesis
RNA processing & translation
CCND3, EIF3H, EIF3L, ERP29, FBL, FXYD5, LDHB, LTB +8 moreView in SCUBA
EnterocytesTranslation Elongation
RNA processing & translation
ATP5F1E, ATP5MC2, EEF1A1, EEF1B2, EIF3E, NACA, NDUFC2, PFDN5 +5 moreView in SCUBA
FibroblastsRibosome Biogenesis
Housekeeping
EEF1B2, EIF3G, EIF3K, RPL36AL, RPL4, RPS10, SLC25A6, SNRPD2 +1 moreView in SCUBA
Gamma-delta T cellsTranslation Initiation
RNA processing & translation
C12orf57, COMMD6, COX4I1, COX7C, EEF1B2, EEF1D, EEF1G, EIF3E +18 more
Glial cellsNascent Polypeptide Translation
RNA processing & translation
EEF1A1, EIF3K, ERH, FAU, LGALS3, NACA, NDUFA4, RACK1 +2 moreView in SCUBA
Goblet cellsCo-translational Chaperone
Protein processing & ER
ATP5MC2, COMMD6, FTH1, FTL, HIGD2A, NACA, PFDN5, TOMM7View in SCUBA
Innate lymphoid cellsSUMOylation Program
Protein processing & ER
ATP5MG, ATP6V1G1, C4orf3, COX7C, EDF1, EEF1A1, HINT1, OSTC +5 moreView in SCUBA
Lymphatic endothelialmRNA Translation Regulation
RNA processing & translation
BZW1, CLIC1, EEF1B2, GAPDH, NPM1, SDCBP, YBX1, YWHAEView in SCUBA
MacrophagesMitochondrial OXPHOS
Mitochondrial & OxPhos
APRT, ARPC3, ATP5F1E, ATP5MF, ATP5MG, BLOC1S1, CLTB, COX4I1 +28 moreView in SCUBA
Mucosal-associated invariant T cellTranslation Elongation
RNA processing & translation
BAX, COX4I1, EEF1B2, EEF1D, EIF3K, FAU, FTL, GPX4 +8 more
Natural Killer cellsTranslation Elongation
RNA processing & translation
COMMD6, EEF1A1, EEF1B2, EEF1D, EIF3E, NACA, NOP53, PFDN5 +3 moreView in SCUBA

About the gene

SynonymsBTF3a, BTF3b, NACB
Chromosome5: 73498408-73505667
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionChaperone
Biological processProtein transport, Transcription, Transcription regulation, Transport

Function

When associated with NACA, prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. BTF3 is also a general transcription factor that can form a stable complex with RNA polymerase II. Required for the initiation of transcription

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.