SCUBA

LGALS3 — Galectin 3

LGALS3 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

LGALS3's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsCell motility/adhesion
migration & adhesion
ANXA2, CCDC107, CYBA, FAM50A, GLIPR2, GRAP2, GYG1, ITM2B +14 moreView in SCUBA
EndothelialQuiescent EC Identity
Endothelial cell development
ADRB1, CAMK2D, CLU, CYP1B1, FAM20A, FOXP1, FZD6, GCHFR +19 moreView in SCUBA
EnterocytesAbundant Transcript Baseline
Housekeeping
ATP5IF1, C15orf48, CALM2, CHCHD2, CSTB, GHITM, KRT8, MPC2 +6 moreView in SCUBA
FibroblastsProteolytic Fibroblast State
ECM remodeling
ANXA2, CTSK, EMP3, MPZL1, PCOLCE, ROBO1, S100A10, S100A16 +3 moreView in SCUBA
Glial cellsNascent Polypeptide Translation
RNA processing & translation
BTF3, EEF1A1, EIF3K, ERH, FAU, NACA, NDUFA4, RACK1 +2 moreView in SCUBA
Goblet cellsMucosal Antibacterial Defense
Immune function
ANXA11, B3GNT7, C15orf48, C19orf33, CLIC1, CSTB, CYSTM1, ELOB +8 moreView in SCUBA
Innate lymphoid cellsILC Survival Residency
Gut residency
ARID4B, BAZ1A, BCL2A1, CD44, CSF2, CTSH, CXCL8, DUSP4 +25 moreView in SCUBA
Lymphatic endothelialActomyosin Cytoskeleton
Cytoskeletal
BRI3, CD63, CFL1, CHCHD2, COX4I1, EDF1, GABARAPL2, HINT1 +8 moreView in SCUBA
MacrophagesGlycolytic Redox Metabolism
Lipid metabolism
AGPAT2, ANXA5, ATP6V1F, BCKDK, BRI3, C1orf122, CLIC1, ELOC +18 moreView in SCUBA
Mucosal-associated invariant T cellMucosal MAIT Homing
migration & adhesion
BLK, BRD9, CCR6, DSEL, ERN1, FUT7, LPAR6, LST1 +5 more
NeutrophilsGlycolytic Metabolism
Housekeeping
CSTB, CTSD, ENO1, FAM210A, GAPDH, GRN, GSTO1, LDHA +4 more
Smooth muscle cellsAdhesion Activation
Migration & adhesion
ANXA2, ATP1B3, CAPNS1, CD44, CYBRD1, FHL2, LAMC1, LGALS3BP +3 moreView in SCUBA

About the gene

SynonymsGALIG, LGALS2, MAC-2
Chromosome14: 55124110-55145423
Predicted locationIntracellular, Secreted
Essential geneNo
Protein classCancer-related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Molecular functionIgE-binding protein
Biological processDifferentiation, Immunity, Innate immunity, mRNA processing, mRNA splicing

Function

Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis (By similarity). In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells. Together with TRIM16, coordinates the recognition of membrane damage with mobilization of the core autophagy regulators ATG16L1 and BECN1 in response to damaged endomembranes.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.