SCUBA

CD47 — CD47 molecule

CD47 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CD47's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsB-cell activation
B cell maturation
ADAM19, ARHGAP30, CD164, CD19, CLN8, CPEB4, ELK3, FNIP1 +15 moreView in SCUBA
EndothelialComplement Innate Immune
Inflammation
C1R, C1S, CNDP2, COL5A2, CTSS, GRINA, GSDMD, LGALS9 +9 moreView in SCUBA
Gamma-delta T cellsγδ T Cell Identity
T cell maturation
AGAP1, AGPAT4, C1orf21, CD226, GAS7, ITGA5, ITGAM, MYO1G +7 more
Lymphatic endothelialVascular Lumen Formation
endothelial development
ANXA4, BLCAP, GINM1, LMAN1, MTDH, RASIP1, STAT1View in SCUBA
MacrophagesGlycogen Metabolism
Housekeeping
ARL2BP, BTF3L4, CAPN1, CRLS1, DCTD, DSTN, GLOD4, GPR65 +24 moreView in SCUBA
MonocytesInflammasome Activation
Innate immunity
AIM2, APOBEC3G, ARID5B, BATF3, BST2, CASP5, CNDP2, CYSTM1 +4 moreView in SCUBA
Mucosal-associated invariant T cellChemokine Receptor Migration
migration & adhesion
CCR1, CCR2, CCR5, FAM78A, KRIT1, LUC7L3, MTG1, PHF14 +6 more
Natural Killer cellsNK Homing & Residency
Homing & TEM
C11orf21, CTSW, FXYD5, PRMT2, RIPOR2, S1PR4, SAMHD1, TFDP2 +2 moreView in SCUBA

About the gene

SynonymsIAP, MER6, OA3
Chromosome3: 108043091-108091862
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classCD markers, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Biological processAngiogenesis, Apoptosis, Cell adhesion, Inflammatory response

Function

Adhesive protein that mediates cell-to-cell interactions. Acts as a receptor for thrombospondin THBS1 and as modulator of integrin signaling through the activation of heterotrimeric G proteins. Involved in signal transduction, cardiovascular homeostasis, inflammation, apoptosis, angiogenesis, cellular self-renewal, and immunoregulation. Plays a role in modulating pulmonary endothelin EDN1 signaling. Modulates nitrous oxide (NO) signaling, in response to THBS1, hence playing a role as a pressor agent, supporting blood pressure (By similarity). Plays an important role in memory formation and synaptic plasticity in the hippocampus (By similarity). Receptor for SIRPA, binding to which prevents maturation of immature dendritic cells and inhibits cytokine production by mature dendritic cells. Interaction with SIRPG mediates cell-cell adhesion, enhances superantigen-dependent T-cell-mediated proliferation and costimulates T-cell activation. Positively modulates FAS-dependent apoptosis in T-cells, perhaps by enhancing FAS clustering (By similarity). Plays a role in suppressing angiogenesis and may be involved in metabolic dysregulation during normal aging. In response to THBS1, negatively modulates wound healing (By similarity). Inhibits stem cell self- renewal, in response to THBS1, probably by regulation of the stem cell transcription factors POU5F1/OCT4, SOX2, MYC/c-Myc and KLF4 (By similarity). May play a role in membrane transport and/or integrin dependent signal transduction. May prevent premature elimination of red blood cells (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.