SCUBA

MYC — MYC proto-oncogene, bHLH transcription factor

MYC belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

MYC's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsNF-kB activation
TCR/AP1/NFKb pathway
ABCF1, BCL2A1, BUD23, BZW2, CALR, CEBPZ, DDX21, DENND4A +21 moreView in SCUBA
EndothelialInflammatory Angiogenesis
Endothelial cell development
FAM241A, FAM43A, KLF6, NFATC1, PHLDA1, PIM3, PLEKHO2, RALGDS +7 moreView in SCUBA
FibroblastsNF-κB Epigenetic Reprogramming
Inflammatory
BCL3, BTG2, CDKN1A, CSRNP1, DUSP5, EGR2, KDM6B, KLF10 +3 moreView in SCUBA
Gamma-delta T cellsNaïve T Cell State
T cell maturation
ARL14EP, CCR2, CD27, CD28, CD40LG, CD82, CNN2, CPNE2 +19 more
Goblet cellsNotch Secretory Specification
Epithelial development
EDN1, EREG, FKBP1A, GPRC5C, HES4, HES5, NOTCH2, PDGFA +4 moreView in SCUBA
Lymphatic endothelialAP-1 Immediate Early
Inflammation
DUSP1, EGR1, FOS, FOSB, HES1, HSPA8, IER2, JUN +7 moreView in SCUBA
MacrophagesHypoxia Stress Response
Stress
ACE, AMPD3, APP, ASPH, BCAT1, BEX3, BHLHE41, BNIP3 +34 moreView in SCUBA
Smooth muscle cellsNR4A-ADAMTS Activation
Stress
ADAMTS1, ADAMTS4, ADAMTS9, AVPR1A, DUSP8, HIPK2, KLF9, NR4A1 +5 moreView in SCUBA

About the gene

SynonymsbHLHe39, c-Myc, MYCC
Chromosome8: 127735434-127742951
Predicted locationIntracellular
Essential geneYes
Protein classCancer-related genes, Disease related genes, Essential proteins, Human disease related genes, Predicted intracellular proteins, Transcription factors
Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Function

Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells (By similarity). Functions with TAF6L to activate target gene expression through RNA polymerase II pause release (By similarity). Positively regulates transcription of HNRNPA1, HNRNPA2 and PTBP1 which in turn regulate splicing of pyruvate kinase PKM by binding repressively to sequences flanking PKM exon 9, inhibiting exon 9 inclusion and resulting in exon 10 inclusion and production of the PKM M2 isoform.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.