SCUBA

HNRNPM — Heterogeneous nuclear ribonucleoprotein M

HNRNPM belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

HNRNPM's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsChromatin Remodeling
DNA/chromatin regulation
ANP32B, ATP5IF1, CALM3, CBX3, COMMD4, HAT1, HMGA1, HMGB1 +9 moreView in SCUBA
CD4⁺ T cellsT cell activation
TCR/AP1/NFKb pathway
ANKS1B, ARF6, CCT6A, EHD4, IRF4, MAP2K3, PFDN2, TRIB1 +3 moreView in SCUBA
CD8⁺ T cellsProteostasis Translation
Protein processing & ER
BZW1, CCT5, CCT7, EIF2S2, HNRNPC, MDH1, PCBP1, PSMD13 +3 moreView in SCUBA
EndothelialDNA Damage Repair
DNA/chromatin regulation
APPL1, GPAA1, HMGB1, HNRNPR, NAP1L4, NCL, PRDX3, PRKDC +7 moreView in SCUBA
Gamma-delta T cellsmRNA Splicing
RNA processing & translation
ARHGDIA, DDX27, DDX59, EIF2AK1, EWSR1, FBXL5, GNL1, GTF2F1 +14 more
Goblet cellsChromatin RNA Regulation
chromatin regulation & transcription
ANP32A, CBX1, HDAC2, HNRNPA0, KHDRBS1, NONO, RBMX, RCN2 +1 moreView in SCUBA
Hematopoietic progenitor cellsChromatin Remodeling
Stemness
CBX3, EIF3A, EIF5B, GDF11, NMNAT3, RFX7, RIF1, SMARCC1 +4 more
Innate lymphoid cellsPre-mRNA Splicing
RNA processing & translation
AAK1, CDC42SE2, CIB1, DDX46, KRT10, KTN1, LARP7, LYRM2 +3 moreView in SCUBA
MacrophagesRNA Processing & Repair
Housekeeping
BRD7, CCDC59, CCT4, CCT6A, CNDP2, EIF3J, EIF5B, EMC4 +31 moreView in SCUBA
Mucosal-associated invariant T cellER Protein Glycosylation
Protein processing & ER
ANAPC5, LMAN2, PDAP1, PKM, PRKCSH, RHOA, RPN1, RPN2 +3 more
Smooth muscle cellsActin remodeling
Cytoskeletal
ARPC5, CALM1, GADD45GIP1, GNAS, KTN1, PLS3, SERBP1View in SCUBA

About the gene

SynonymsCEAR, HNRNPM4, HNRPM, HNRPM4, HTGR1, NAGR1
Chromosome19: 8444767-8489114
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionRibonucleoprotein, RNA-binding
Biological processmRNA processing, mRNA splicing

Function

Pre-mRNA binding protein in vivo, binds avidly to poly(G) and poly(U) RNA homopolymers in vitro. Involved in splicing. Acts as a receptor for carcinoembryonic antigen in Kupffer cells, may initiate a series of signaling events leading to tyrosine phosphorylation of proteins and induction of IL-1 alpha, IL-6, IL-10 and tumor necrosis factor alpha cytokines

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.