SCUBA

SRSF2 — Serine and arginine rich splicing factor 2

SRSF2 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SRSF2's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsmRNA splicing factors
RNA processing
CALM1, CALM2, CKS2, CYCS, EIF4A3, HNRNPA0, HNRNPA2B1, HNRNPAB +12 moreView in SCUBA
CD4⁺ T cellsPol II Transcription Regulation
DNA/chromatin regulation
ABHD5, BAIAP2, BRD2, CBX4, CDKN1C, CITED2, CKS2, EHD1 +28 moreView in SCUBA
EndothelialmRNA Splicing
RNA processing & translation
DIAPH1, EIF4A3, FUBP1, GLRX5, HNRNPA2B1, HNRNPA3, HNRNPD, KHDRBS1 +8 moreView in SCUBA
Gamma-delta T cellsAnabolic Activation Response
Housekeeping
ABHD5, ATF4, ATP6V0C, ATP6V1G1, BCL7B, BUD31, CALM2, CHRAC1 +26 more
Glial cellsGlucocorticoid Stress Recovery
Stress
ARL6IP1, EIF4A3, FAM43A, MLF1, NABP1, PNRC1, SAP18, TSC22D3 +3 moreView in SCUBA
Goblet cellsSR Splicing Factors
RNA processing & translation
CLTA, GLRX5, MLEC, NDUFAB1, PPP1R14B, SRSF9, TRIR, UQCRFS1 +1 moreView in SCUBA
Innate lymphoid cellsIntegrated Stress Response
Stress
AMD1, ATF4, CYCS, DDX5, DNAJB6, EIF1, GPBP1, HERPUD1 +3 moreView in SCUBA
MacrophagesRNA Splicing Processing
Housekeeping
ARMCX3, CIRBP, ELK4, GATAD1, H3-3B, HNRNPA2B1, HNRNPA3, HNRNPL +13 moreView in SCUBA
Mucosal-associated invariant T cellIntegrated Stress Response
Stress
ATF4, EIF4A3, EIF5, FAM53C, IFRD1, MARCKSL1, MKNK2, ODC1 +7 more

About the gene

SynonymsPR264, SC-35, SC35, SFRS2, SFRS2A
Chromosome17: 76734115-76737333
Predicted locationIntracellular
Essential geneYes
Protein classCancer-related genes, Essential proteins, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionRNA-binding
Biological processmRNA processing, mRNA splicing

Function

Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5'-GTTCGAGTA-3'. Can bind to beta-globin mRNA and commit it to the splicing pathway. The phosphorylated form (by SRPK2) is required for cellular apoptosis in response to cisplatin treatment

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.