SCUBA

ODC1 — Ornithine decarboxylase 1

ODC1 belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ODC1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsmRNA splicing factors
RNA processing
CALM1, CALM2, CKS2, CYCS, EIF4A3, HNRNPA0, HNRNPA2B1, HNRNPAB +12 moreView in SCUBA
CD4⁺ T cellsPol II Transcription Regulation
DNA/chromatin regulation
ABHD5, BAIAP2, BRD2, CBX4, CDKN1C, CITED2, CKS2, EHD1 +28 moreView in SCUBA
EndothelialInflammatory Stress Response
Stress
CRK, DLC1, GCLM, IFT20, KRAS, SBDS, SERP1, SERPINH1 +7 moreView in SCUBA
FibroblastsBMP-ID Stress Response
Stress
BHLHE40, CCDC184, CFAP20, FOXC2, GADD45G, GDF15, GDNF, HAS1 +9 moreView in SCUBA
Gamma-delta T cellsER Proteotoxic Stress
Stress
ARL4A, BCAS2, CCDC59, CSRNP1, CYCS, EIF5, EXOSC6, FOSB +13 more
Glial cellsInflammatory Activation Response
Inflammation
ANGPTL4, C11orf96, CD83, CEBPD, ENY2, GEM, IDI1, IRF9 +3 moreView in SCUBA
Innate lymphoid cellsILC3 Transcriptional Identity
Differentiation
ABHD5, AKT1S1, ARF4, ATP1A1, CKS2, EGR3, GADD45B, HES1 +12 moreView in SCUBA
MonocytesER Stress Response
Stress
CDKN1B, CFAP20, DDIT3, GIMAP5, HSPA5, KLF2, KLF4, RHOB +2 moreView in SCUBA
Mucosal-associated invariant T cellIntegrated Stress Response
Stress
ATF4, EIF4A3, EIF5, FAM53C, IFRD1, MARCKSL1, MKNK2, PLK2 +7 more
Natural Killer cellsTGF-beta Repression
DNA regulation & transcription
BZW1, GTF2B, HBP1, POLR2K, SKIL, SKP1, SPTY2D1, UBE2D3View in SCUBA
Smooth muscle cellsChaperonin heat-shock
Stress
CYCS, DUSP1, HSPD1, HSPE1, PABPC1, SLC25A25, SRSF3, UBE2D3View in SCUBA

About the gene

SynonymsODC
Chromosome2: 10439968-10448327
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Enzymes, FDA approved drug targets, Human disease related genes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionDecarboxylase, Lyase
Biological processPolyamine biosynthesis

Function

Catalyzes the first and rate-limiting step of polyamine biosynthesis that converts ornithine into putrescine, which is the precursor for the polyamines, spermidine and spermine. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.