SCUBA

NABP1 — Nucleic acid binding protein 1

NABP1 belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

NABP1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsHeat Shock Response
Stress
BAG3, CHORDC1, DDIT4, DEDD2, DNAJA4, DNAJB1, DNAJB4, DNAJB6 +13 moreView in SCUBA
CD4⁺ T cellsHeat Shock Response
Stress
ANKRD37, CHORDC1, DEDD2, DNAJA1, DNAJA4, DNAJB1, DNAJB4, HSP90AA1 +12 moreView in SCUBA
Glial cellsGlucocorticoid Stress Recovery
Stress
ARL6IP1, EIF4A3, FAM43A, MLF1, PNRC1, SAP18, SRSF2, TSC22D3 +3 moreView in SCUBA
Innate lymphoid cellsTranscriptional Activation
DNA regulation & transcription
AKIRIN1, CHORDC1, FAM133B, FAM53C, GOLGB1, GTF2B, IDI1, MORF4L2 +9 moreView in SCUBA
MacrophagesSplicing Factor Regulation
Housekeeping
ARAP1, CCNL1, CELF1, CLK1, FAM53C, IFRD1, INPPL1, KIDINS220 +12 moreView in SCUBA
MonocytesIRF1 Innate Activation
Innate immunity
BAZ1A, CFLAR, FNIP2, IRF1, MARCKS, THAP2, TRIM69, ZFYVE16View in SCUBA
Mucosal-associated invariant T cellApoptosis Regulation
Immune regulation
ARF4, ARRDC3, CARD8, CFLAR, CREBZF, MAPRE2, PCF11, PPP1R10 +1 more
Natural Killer cellsTranscription Elongation Control
DNA regulation & transcription
C6orf62, FAM53C, FUS, HEXIM1, INTS6, MAT2A, PCF11, PPP1R10 +2 moreView in SCUBA
NeutrophilsMyeloid Inflammatory Activation
Inflammatory
AQP9, CPD, FPR1, ITGAX, LITAF, MXD1, NAMPT, SDCBP +5 more
Smooth muscle cellsStromal Chemokine Secretion
Inflammation
C7, CCL19, CCL2, CCL21, CH25H, CXCL12, CXCL2, LINC00924 +9 moreView in SCUBA

About the gene

SynonymsDKFZp667M1322, FLJ13624, FLJ22833, hSSB2, MGC111163, NABP1-OT1, OBFC2A, SOSS-B2, SSB2
Chromosome2: 191678068-191741097
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionDNA-binding
Biological processDNA damage, DNA repair

Function

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. In the SOSS complex, acts as a sensor of single-stranded DNA that binds to single-stranded DNA, in particular to polypyrimidines. The SOSS complex associates with DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM- dependent signaling pathways.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.