SCUBA

PSMB9 — Proteasome 20S subunit beta 9

PSMB9 belongs to a gene co-expression module in 16 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

PSMB9's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsImmunoproteasome IFN
Anti-viral
APRT, BATF, MT1X, MT2A, NIT2, PSME1, PSME2, VAMP5View in SCUBA
CD4⁺ T cellsInterferon response
Anti-viral
ACTN4, CAPZA1, CHMP4A, CHMP5, EFHD2, IL12RB1, LSP1, PARP14 +7 moreView in SCUBA
CD8⁺ T cellsIFN-gamma Stress Response
Inflammation
COX5B, FABP5, MT1E, MT2A, PHPT1, PSME2, SUB1, VOPP1View in SCUBA
EndothelialIFN-gamma Antigen Processing
Inflammation
ERAP2, GBP3, IFI35, OAS1, PSMB8, PSME1, RNF213, SAMD9L +3 moreView in SCUBA
EnterocytesIFN-gamma immunoproteasome
Inflammation
ABCC3, ACTR2, CARD16, CTSS, DMBT1, GOLM1, IQGAP1, PSMB8 +2 moreView in SCUBA
FibroblastsImmunoproteasome MHC-I
Inflammatory
B2M, BST2, EPSTI1, HLA-A, HLA-B, HLA-C, HLA-F, IFI27 +7 moreView in SCUBA
Gamma-delta T cellsCytotoxic Effector Actin
cytotoxicity
ARPC2, ARPC5, ATOX1, BRK1, CFL1, CLIC1, CORO1A, DBI +14 more
Glial cellsType I/II Interferon Response
Inflammation
GBP2, HLA-F, IFI6, IFIT3, ISG15, LY6E, PSMB8, PSME1 +6 moreView in SCUBA
Goblet cellsMHC Class II Antigen Presentation
Immune function
C2, CD74, HLA-DMA, HLA-DPA1, HLA-DPB1, HLA-DQB1, HLA-DRA, HLA-DRB1 +2 moreView in SCUBA
Innate lymphoid cellsAntigen Processing MHC-I
Immune regulation
CMTM6, GUK1, IL2RB, IL4R, MYL12A, PAXX, PSMA5, PSMB8 +8 moreView in SCUBA
Lymphatic endothelialGIMAP mediated permeability
Mitochondrial & OxPhos
AGTRAP, CCNI, GIMAP1, GIMAP4, GIMAP7, GPR146, HEBP1, LYL1 +2 moreView in SCUBA
MacrophagesImmunoproteasome Induction
Inflammatory
CBR1, DAPP1, DYNLT1, EPSTI1, IFI35, LAP3, LGALS9, LYSMD2 +12 moreView in SCUBA
MonocytesImmunoproteasome Antigen Processing
Innate immunity
APOL1, APOL4, FBXO6, IFI27, IFI35, LGALS3BP, PSMB8, PSME1 +5 moreView in SCUBA
Mucosal-associated invariant T cellImmunoproteasome Activity
Inflammation
ABRACL, ARPC5, BANF1, CARD16, CISD3, CYBC1, GIMAP2, IMP3 +4 more
Natural Killer cellsImmunoproteasome Activation
Inflammation
EIF5A, LDHB, PDIA6, PPIA, PSMB3, PSMB8, PSME1, PSME2View in SCUBA
PericytesImmunoproteasome Induction
Inflammatory
CANX, GRN, LY6E, NUCB1, PGK1, PSAP, PSMB8, SELENOW +3 moreView in SCUBA

About the gene

Synonymsbeta1i, LMP2, PSMB6i, RING12
Chromosome6: 32844136-32859851
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Enzymes, FDA approved drug targets, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionHydrolase, Protease, Threonine protease
Biological processHost-virus interaction, Immunity

Function

The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP- dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides. Replacement of PSMB6 by PSMB9 increases the capacity of the immunoproteasome to cleave model peptides after hydrophobic and basic residues.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.