SCUBA

HNRNPDL — Heterogeneous nuclear ribonucleoprotein D like

HNRNPDL belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

HNRNPDL's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsRNA processing
RNA processing
AARSD1, ABHD14A, AMD1, CALM2, CDKN2AIP, CHMP1B, FRAT1, HNRNPAB +7 moreView in SCUBA
EndothelialStress RNA Processing
RNA processing & translation
ARF4, CACYBP, ELOC, ENY2, EWSR1, GNA14, HNRNPF, MAP3K13 +5 moreView in SCUBA
Gamma-delta T cellsmRNA Splicing Processing
RNA processing & translation
ARHGEF1, BECN1, CCNI, DENND4B, EID1, HNRNPA0, KLHDC4, LENG8 +18 more
Glial cellsRNA Splicing Processing
RNA processing & translation
DDX3X, DDX5, HNRNPA2B1, HNRNPAB, HNRNPH1, MAFB, NES, RND3 +2 moreView in SCUBA
Innate lymphoid cellsmRNA Translation
RNA processing & translation
ABHD14B, ARHGDIA, CD2BP2, EEF2, EIF3L, GYPC, H2AJ, HNRNPA0 +6 moreView in SCUBA
Lymphatic endothelialAhR mRNA Regulation
RNA processing & translation
CYP1B1, DHRS3, ESAM, HNRNPH1, LIF, SDC4, TIPARP, TPBG +3 moreView in SCUBA
MacrophagesmRNA Splicing Processing
Housekeeping
AP3D1, BAZ1B, CCDC47, CHTOP, CTCF, EIF1AX, EIF3A, HDLBP +29 moreView in SCUBA
Mucosal-associated invariant T cellmRNA 3' Processing
RNA processing & translation
ATXN2L, CD6, DNM2, EIF4A2, MLLT6, NOP58, RBM15B, RNF10 +3 more
Smooth muscle cellsBasal Metabolic Housekeeping
Housekeeping
ARPC2, C11orf58, C1orf43, C4orf3, CNBP, COX17, GUK1, HNRNPH2 +6 moreView in SCUBA

About the gene

SynonymsHNRPDL, JKTBP, laAUF1, LGMD1G
Chromosome4: 82422565-82430462
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Predicted intracellular proteins
Molecular functionActivator, DNA-binding, Repressor, RNA-binding
Biological processTranscription, Transcription regulation

Function

Acts as a transcriptional regulator. Promotes transcription repression. Promotes transcription activation in differentiated myotubes (By similarity). Binds to double- and single-stranded DNA sequences. Binds to the transcription suppressor CATR sequence of the COX5B promoter (By similarity). Binds with high affinity to RNA molecules that contain AU-rich elements (AREs) found within the 3'-UTR of many proto-oncogenes and cytokine mRNAs. Binds both to nuclear and cytoplasmic poly(A) mRNAs. Binds to poly(G) and poly(A), but not to poly(U) or poly(C) RNA homopolymers. Binds to the 5'-ACUAGC-3' RNA consensus sequence

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.