SCUBA

SLC38A1 — Solute carrier family 38 member 1

SLC38A1 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SLC38A1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsB-cell activation
B cell maturation
ADAM19, ARHGAP30, CD164, CD19, CD47, CLN8, CPEB4, ELK3 +15 moreView in SCUBA
EndothelialInflammatory Angiogenesis
ECM remodeling
ADM, APOD, CHST15, CMTM3, GPIHBP1, GRAP, HOMER3, LOX +7 moreView in SCUBA
EnterocytesTransit-amplifying progenitor
Epithelial development
CCND2, CLINT1, EHF, ELOVL6, HSD17B12, MSI2, PKP2, RBM3View in SCUBA
Gamma-delta T cellsIFN-gamma Receptor Signaling
Inflammation
BORCS5, CCDC93, CDC42SE2, DHCR7, EML4, IFNGR1, PDE4B, PGRMC2 +3 more
Goblet cellsAdhesion & Transport
Cytoskeletal
AHCYL1, CHMP1B, DDX5, DYNC1H1, DYNC1LI2, EIF4G2, ITGB1, PTTG1IP +4 moreView in SCUBA
Hematopoietic progenitor cellsT/NK Cell Identity
Lymphcyte development
ATM, BAZ2B, CD53, LCP1, LGMN, MED13L, NKG7, PREX1 +3 more
Mucosal-associated invariant T cellRUNX3 Tissue Identity
T cell maturation
B4GALT1, CD44, CDK17, CHD1, CYLD, EML4, EP300, GPBP1 +10 more
Smooth muscle cellsMuscle Energy Metabolism
Mitochondrial & OxPhos
ANP32B, HACD1, HEY2, MAP3K20, MRPS6, PIP5K1B, PNRC2, PPP1R1A +4 moreView in SCUBA

About the gene

SynonymsATA1, NAT2, SAT1
Chromosome12: 46183063-46270017
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classFDA approved drug targets, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Biological processAmino-acid transport, Ion transport, Sodium transport, Symport, Transport

Function

Symporter that cotransports short-chain neutral amino acids and sodium ions from the extraccellular to the intracellular side of the cell membrane. The transport is elctrogenic, pH dependent and driven by the Na(+) electrochemical gradient. Participates in the astroglia-derived glutamine transport into GABAergic interneurons for neurotransmitter GABA de novo synthesis (By similarity). May also contributes to amino acid transport in placental trophoblasts. Also regulates synaptic plasticity.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.