SCUBA

SLC5A3 — Solute carrier family 5 member 3

SLC5A3 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SLC5A3's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsHeat Shock Response
Stress
BAG3, CHORDC1, DDIT4, DEDD2, DNAJA4, DNAJB1, DNAJB4, DNAJB6 +13 moreView in SCUBA
CD4⁺ T cellsT-cell quiescence regulation
Immune regulation
CDC42SE2, CDKN1B, FOXP1, ICAM2, KRAS, MRPS6, MSL3, SERINC5 +4 moreView in SCUBA
CD8⁺ T cellsCD8 Effector Maturation
T cell maturation
AKAP13, ATXN1, CD81, DDX17, DDX3X, ETS1, IKZF3, JUND +8 moreView in SCUBA
EndothelialEndothelial Chemokine Response
Chemotaxis
BMP2, CCL2, CEBPB, CEBPD, CNKSR3, CXCL1, CXCL2, CXCL3 +14 moreView in SCUBA
Gamma-delta T cellsER/Osmotic Stress
Stress
ABHD3, DNAJA4, FKBP4, HIBCH, HSD17B7, HSPA4, HSPB1, MBNL2 +7 more
Innate lymphoid cellsTranscriptional Activation
DNA regulation & transcription
AKIRIN1, CHORDC1, FAM133B, FAM53C, GOLGB1, GTF2B, IDI1, MORF4L2 +9 moreView in SCUBA
MacrophagesOsmotic Stress Response
Stress
ANKRD28, BZW1, CD109, CXCL8, CYB5R4, CYTIP, DUSP4, EMP3 +25 moreView in SCUBA
MonocytesInflammatory Stress Response
Stress
ARL5B, ATF3, CCRL2, CD83, DUSP10, IL1B, NFE2L2, RASGEF1B +2 moreView in SCUBA
Smooth muscle cellsBMP/TGF-beta response
Activation
APBB2, GLS, ID1, ID2, IRS2, KLF10, RND3, SEC11C +1 moreView in SCUBA

About the gene

SynonymsSMIT, SMIT1
Chromosome21: 34073578-34106260
Predicted locationMembrane
Essential geneNo
Protein classMetabolic proteins, Predicted membrane proteins, Transporters
Biological processIon transport, Sodium transport, Symport, Transport

Function

Electrogenic Na(+)-coupled sugar symporter that actively transports myo-inositol and its stereoisomer scyllo-inositol across the plasma membrane, with a Na(+) to sugar coupling ratio of 2:1 (By similarity). Maintains myo-inositol concentration gradient that defines cell volume and fluid balance during osmotic stress, in particular in the fetoplacental unit and central nervous system (By similarity). Forms coregulatory complexes with voltage-gated K(+) ion channels, allosterically altering ion selectivity, voltage dependence and gating kinetics of the channel. In turn, K(+) efflux through the channel forms a local electrical gradient that modulates electrogenic Na(+)-coupled myo-inositol influx through the transporter. Associates with KCNQ1-KCNE2 channel in the apical membrane of choroid plexus epithelium and regulates the myo-inositol gradient between blood and cerebrospinal fluid with an impact on neuron excitability (By similarity). Associates with KCNQ2- KCNQ3 channel altering ion selectivity, increasing Na(+) and Cs(+) permeation relative to K(+) permeation. Provides myo- inositol precursor for biosynthesis of phosphoinositides such as PI(4,5)P2, thus indirectly affecting the activity of phosphoinositide- dependent ion channels and Ca(2+) signaling upon osmotic stress.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.