SCUBA

SNX9 — Sorting nexin 9

SNX9 belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SNX9's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNF-kB activation/survival
BCR/AP1/NFKb pathway
ARL4C, BCL2A1, CCR7, DDX21, GNG2, ICAM1, IRF2BPL, LMNA +9 moreView in SCUBA
CD4⁺ T cellsT-cell activation
TCR/AP1/NFKb pathway
C16orf87, CAMK1, CBLB, CD4, CD7, CDK6, CIAO1, COPB2 +7 moreView in SCUBA
EnterocytesEGFR wound response
Epithelial development
CLDN4, DDX60L, ERRFI1, GPRC5A, KLF6, STOMView in SCUBA
Gamma-delta T cellsHypoxia Tissue Adaptation
Tissue residence
ABCB1, ADAMTS17, ANKRD28, CCRL2, EPAS1, FAM3C, KLHL6, LDLRAD4 +10 more
Innate lymphoid cellsILC3 identity
Differentiation
ABCC1, BCL6, CCND3, CELF2, CHKB, DNAAF2, ENSG00000285976, EREG +31 moreView in SCUBA
Lymphatic endothelialTBK1-JAK Immune Signaling
Inflammation
ADAM17, AGO2, ELL2, FNIP2, IQGAP1, JAK1, MAP4K4, NAMPT +6 moreView in SCUBA
MacrophagesChromatin Epigenetic Regulation
Housekeeping
ABHD17B, ANKH, ARHGAP21, CCNH, CTTNBP2NL, DMXL1, EEIG2, ELF2 +21 moreView in SCUBA
MonocytesG-protein Membrane Remodeling
Migration & adhesion
ADA, ANKRD9, CXCL16, DNMBP, EPB41L3, GFOD1, GNA12, GNA13 +7 moreView in SCUBA
Mucosal-associated invariant T cellcAMP Immune Regulation
Immune regulation
CREM, FAM177A1, JMJD6, MAPKAPK2, METRNL, PDE4B, SYAP1, USP36
Natural Killer cellsGut-Homing NK
Gut residency
CCR9, FAM3C, GRAMD2B, OXNAD1, PLPP1, PRKAR2B, SMIM3, TRAT1View in SCUBA
Smooth muscle cellsPericellular Proteolysis
ECM remodeling
AHNAK2, BNC2, CRYBG3, CTSA, HTRA1, MMP14, S100A16, TMED10View in SCUBA

About the gene

SynonymsSDP1, SH3PX1, SH3PXD3A
Chromosome6: 157700387-157945077
Predicted locationIntracellular
Essential geneNo
Protein classPlasma proteins, Predicted intracellular proteins
Biological processCell cycle, Cell division, Endocytosis, Mitosis, Protein transport, Transport

Function

Involved in endocytosis and intracellular vesicle trafficking, both during interphase and at the end of mitosis. Required for efficient progress through mitosis and cytokinesis. Required for normal formation of the cleavage furrow at the end of mitosis. Plays a role in endocytosis via clathrin-coated pits, but also clathrin- independent, actin-dependent fluid-phase endocytosis. Plays a role in macropinocytosis. Promotes internalization of TNFR. Promotes degradation of EGFR after EGF signaling. Stimulates the GTPase activity of DNM1. Promotes DNM1 oligomerization. Promotes activation of the Arp2/3 complex by WASL, and thereby plays a role in the reorganization of the F-actin cytoskeleton. Binds to membranes enriched in phosphatidylinositol 4,5-bisphosphate and promotes membrane tubulation. Has lower affinity for membranes enriched in phosphatidylinositol 3- phosphate.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.