SCUBA

LMNA — Lamin A/C

LMNA belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

LMNA's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNF-kB activation/survival
BCR/AP1/NFKb pathway
ARL4C, BCL2A1, CCR7, DDX21, GNG2, ICAM1, IRF2BPL, NAMPT +9 moreView in SCUBA
CD4⁺ T cellsGlucocorticoid Immunoregulation
Immune regulation
AHNAK, BTG1, CRIP1, GGNBP2, IDS, INSIG1, IRS2, JUND +11 moreView in SCUBA
EndothelialChronic Inflammatory Activation
Inflammation
ABL2, ADAMTS9, DDX21, EMP1, FOSL2, HRH1, KRT10, PNP +2 moreView in SCUBA
Gamma-delta T cellsTGF-beta Response
Immune regulation
ADGRE5, CD83, CHMP1B, CHST7, DDIT3, DNAAF2, EHD4, FAM43A +15 more
Glial cellsCOX-2/NF-κB Inflammation
Inflammation
ABL2, ARID5A, BCL3, EMP1, PDLIM3, PHLDA1, PTGS2View in SCUBA
Goblet cellsStress Survival Response
Stress
EPHA2, ERRFI1, EZR, KLF6, LDLR, MCL1, NEDD9, SQSTM1 +3 moreView in SCUBA
Innate lymphoid cellsAP-1 Transcriptional Activation
DNA regulation & transcription
AHNAK, ALYREF, CD81, CDV3, CITED4, ESYT2, ETS1, GNAI2 +28 moreView in SCUBA
MacrophagesMacrophage Lipid Sensing
Lipid metabolism
ARL4A, ARL4C, BIRC2, CES2, DDX21, DDX24, DDX27, GPR183 +12 moreView in SCUBA
MonocytesIntegrin-mediated Migration
Migration & adhesion
DNAAF1, EIF4E, ITGA5, ITGB8, MSC, NRIP3, PHLDA1, PNP +7 moreView in SCUBA
Mucosal-associated invariant T cellBMP/TGF-β Inhibitory
Immune regulation
ACHE, BUD31, FAM43A, ID1, N4BP3, PRR7, RGS16, SMAD7 +2 more
Smooth muscle cellsActin Cytoskeletal Scaffold
Cytoskeletal
ACTN4, ATP2B4, ATRX, DDX5, DLGAP4, EIF4G2, FAT1, GNAI2 +13 moreView in SCUBA

About the gene

SynonymsCMD1A, HGPS, LGMD1B, LMN1, LMNL1, MADA, PRO1
Chromosome1: 156082573-156140081
Predicted locationIntracellular
Essential geneYes
Protein classCancer-related genes, Disease related genes, Essential proteins, Human disease related genes, Plasma proteins, Predicted intracellular proteins

Function

Lamins are intermediate filament proteins that assemble into a filamentous meshwork, and which constitute the major components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane. Lamins provide a framework for the nuclear envelope, bridging the nuclear envelope and chromatin, thereby playing an important role in nuclear assembly, chromatin organization, nuclear membrane and telomere dynamics. Lamin A and C also regulate matrix stiffness by conferring nuclear mechanical properties. The structural integrity of the lamina is strictly controlled by the cell cycle, as seen by the disintegration and formation of the nuclear envelope in prophase and telophase, respectively. Lamin A and C are present in equal amounts in the lamina of mammals. Also invoved in DNA repair: recruited by DNA repair proteins XRCC4 and IFFO1 to the DNA double-strand breaks (DSBs) to prevent chromosome translocation by immobilizing broken DNA ends. Required for normal development of peripheral nervous system and skeletal muscle and for muscle satellite cell proliferation. Required for osteoblastogenesis and bone formation. Also prevents fat infiltration of muscle and bone marrow, helping to maintain the volume and strength of skeletal muscle and bone. Required for cardiac homeostasis. Prelamin-A/C can accelerate smooth muscle cell senescence. It acts to disrupt mitosis and induce DNA damage in vascular smooth muscle cells (VSMCs), leading to mitotic failure, genomic instability, and premature senescence

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.