SCUBA

PRNP — Prion protein

PRNP belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

PRNP's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsImmediate early response
BCR/AP1/NFKb pathway
CCNT1, CREM, HES4, JMY, JOSD1, KDM4B, NR4A3, PCNX4 +7 moreView in SCUBA
FibroblastsInflammatory Fibroblast Activation
Inflammatory
ADAM9, CALU, CLMP, CNN3, GLIPR1, ITGAV, MCRIP1, NAP1L1 +5 moreView in SCUBA
Glial cellsMyelinating Schwann Cell
Myelination
ALDH1A1, ARHGAP15, CXCL12, FCGR2B, MPZ, MXRA8, NTM, RNASE1 +1 moreView in SCUBA
Innate lymphoid cellsmRNA Translation
RNA processing & translation
ABHD14B, ARHGDIA, CD2BP2, EEF2, EIF3L, GYPC, H2AJ, HNRNPA0 +6 moreView in SCUBA
Lymphatic endothelialNF-κB Negative Feedback
Inflammation
BMP2, C2CD4B, ICAM1, IRF8, KLF6, MAFF, NFIL3, NFKBIA +4 moreView in SCUBA
MacrophagesEndosomal Membrane Trafficking
Vesicular traficking
A2M, AP1B1, ARHGAP4, ARHGEF6, ATG4C, B3GNT7, CRTAP, ETV5 +20 moreView in SCUBA
Mucosal-associated invariant T cellNF-κB RNA Regulation
RNA processing & translation
ARIH2, ATP1A1, BCLAF1, BNIP2, CALR, COG3, DDX6, EIF4G2 +14 more
Natural Killer cellsNK Cell Exhaustion
Immune regulation
CEBPB, CEMIP2, DENND3, FMNL1, HAVCR2, IFNGR1, METRNL, PDE4D +3 moreView in SCUBA
Smooth muscle cellsBasement Membrane Matrix
ECM remodeling
ADH5, C4orf48, EFEMP2, FBXL7, MLXIP, MXRA8, RTN4, VWA1View in SCUBA

About the gene

SynonymsAltPrP, CD230, CJD, GSS, PRIP, PRP
Chromosome20: 4686350-4701590
Predicted locationMembrane
Essential geneNo
Protein classCD markers, Disease related genes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted membrane proteins, Transporters
Molecular functionPrion
Biological processCell cycle, Growth arrest

Function

Its primary physiological function is unclear. May play a role in neuronal development and synaptic plasticity. May be required for neuronal myelin sheath maintenance. May promote myelin homeostasis through acting as an agonist for ADGRG6 receptor. May play a role in iron uptake and iron homeostasis. Soluble oligomers are toxic to cultured neuroblastoma cells and induce apoptosis (in vitro) (By similarity). Association with GPC1 (via its heparan sulfate chains) targets PRNP to lipid rafts. Also provides Cu(2+) or Zn(2+) for the ascorbate-mediated GPC1 deaminase degradation of its heparan sulfate side chains (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.