SCUBA

YME1L1 — YME1 like 1 ATPase

YME1L1 belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

YME1L1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsATF4 Stress Response
Stress
ATF4, BRD2, CCNYL1, ERO1B, FUS, GLA, HMGCS1, INSIG1 +3 moreView in SCUBA
CD4⁺ T cellsPol II Transcription Regulation
DNA/chromatin regulation
ABHD5, BAIAP2, BRD2, CBX4, CDKN1C, CITED2, CKS2, EHD1 +28 moreView in SCUBA
FibroblastsCo-transcriptional RNA Processing
Housekeeping
FUS, IFRD1, INTS6, PCF11, PPP1R10, RSRP1, TSPYL2View in SCUBA
Gamma-delta T cellsStress Epigenetic Silencing
DNA/chromatin regulation
ALKBH5, ANKHD1, EPC2, FAM53C, MXD1, NEU1, OTUD4, PHF1 +8 more
Glial cellsGlucocorticoid Stress Recovery
Stress
ARL6IP1, EIF4A3, FAM43A, MLF1, NABP1, PNRC1, SAP18, SRSF2 +3 moreView in SCUBA
Innate lymphoid cellsDissociation Stress Response
Stress
C12orf57, CA2, CALM2, EHD1, EIF4A2, IER2, MEPCE, NDRG1 +9 moreView in SCUBA
MacrophagesER-Golgi Trafficking
Vesicular traficking
ADD1, AFTPH, AZIN1, COPA, DYNC1H1, HNRNPC, JOSD1, LCP2 +23 moreView in SCUBA
Mucosal-associated invariant T cellMitochondrial Quality Control
Mitochondrial & OxPhos
COQ7, EPS8, LETM2, PATL2, SDR42E2, TBCC, ZBTB10
Natural Killer cellsTranscription Elongation Control
DNA regulation & transcription
C6orf62, FAM53C, FUS, HEXIM1, INTS6, MAT2A, NABP1, PCF11 +2 moreView in SCUBA
Smooth muscle cellsBAG3-HSPB8 proteostasis
Stress
BAG3, C6orf62, CREBRF, DNAJB4, EOGT, GOLGB1, HSPB8, IFRD1 +5 moreView in SCUBA

About the gene

SynonymsYME1L
Chromosome10: 27110111-27155266
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classDisease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins
Molecular functionHydrolase, Metalloprotease, Protease

Function

ATP-dependent metalloprotease that catalyzes the degradation of folded and unfolded proteins with a suitable degron sequence in the mitochondrial intermembrane region. Plays an important role in regulating mitochondrial morphology and function by cleaving OPA1 at position S2, giving rise to a form of OPA1 that promotes maintenance of normal mitochondrial structure and mitochondrial protein metabolism. Ensures cell proliferation, maintains normal cristae morphology and complex I respiration activity, promotes antiapoptotic activity and protects mitochondria from the accumulation of oxidatively damaged membrane proteins. Required to control the accumulation of nonassembled respiratory chain subunits (NDUFB6, OX4 and ND1). Involved in the mitochondrial adaptation in response to various signals, such as stress or developmental cues, by mediating degradation of mitochondrial proteins to rewire the mitochondrial proteome. Catalyzes degradation of mitochondrial proteins, such as translocases, lipid transfer proteins and metabolic enzymes in response to nutrient starvation in order to limit mitochondrial biogenesis: mechanistically, YME1L is activated by decreased phosphatidylethanolamine levels caused by LPIN1 activity in response to mTORC1 inhibition. Acts as a regulator of adult neural stem cell self-renewal by promoting mitochondrial proteome rewiring, preserving neural stem and progenitor cells self-renewal (By similarity). Required for normal, constitutive degradation of PRELID1. Catalyzes the degradation of OMA1 in response to membrane depolarization. Mediates degradation of TIMM17A downstream of the integrated stress response (ISR). Catalyzes degradation of MICU1 when MICU1 is not assembled via an interchain disulfide.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.