SCUBA

BRD2 — Bromodomain containing 2

BRD2 belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

BRD2's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsATF4 Stress Response
Stress
ATF4, CCNYL1, ERO1B, FUS, GLA, HMGCS1, INSIG1, KLF10 +3 moreView in SCUBA
CD4⁺ T cellsPol II Transcription Regulation
DNA/chromatin regulation
ABHD5, BAIAP2, CBX4, CDKN1C, CITED2, CKS2, EHD1, EIF4A1 +28 moreView in SCUBA
CD8⁺ T cellsPre-mRNA Splicing
RNA processing & translation
EIF3A, FUS, HNRNPU, HSPA9, NCL, PNN, RBM25, RBM39 +5 moreView in SCUBA
FibroblastsChromatin Transcriptional Regulation
Developmental
C6orf62, CBX4, GLS, KLHL15, LSMEM1, MKNK2, NUFIP2, NXF1 +4 moreView in SCUBA
Gamma-delta T cellsAP-1 Immediate Early Response
Stress
CITED2, CSKMT, EGR1, EIF4A2, FRAT1, FRAT2, GADD45B, HEXIM1 +25 more
Glial cellsDNA Damage Response
Stress
FAM53C, GADD45B, IER5, ING1, NFKBIZ, PABPC1, SRSF3, TUBB4B +1 moreView in SCUBA
Innate lymphoid cellsImmediate Early Response
activation
ATF3, BTG2, CCNL1, DDX3X, DNAJA1, EGR1, EIF4A3, EIF5 +8 moreView in SCUBA
Lymphatic endothelialDNA Damage Response
DNA/chromatin regulation
BTG2, CITED2, H2AX, HBEGF, HEXIM1, INTS6, MAFB, NR4A1 +7 moreView in SCUBA
MacrophagesPre-mRNA Splicing
Housekeeping
AAK1, ANKRD12, ANKRD13D, ARGLU1, C3orf62, CREBZF, DMTF1, FAM133B +20 moreView in SCUBA
Mucosal-associated invariant T cellAP-1 Immediate Early
Stress
AMD1, CITED2, CSKMT, FUS, GADD45B, GADD45G, H2AX, HEXIM1 +17 more
Smooth muscle cellsImmediate Early Response
Stress
ABHD5, ARC, ARL5B, DDIT3, EGR3, GDF11, HEXIM1, IER5 +4 moreView in SCUBA

About the gene

SynonymsBRD2-IT1, D6S113E, FSRG1, KIAA9001, NAT, RING3
Chromosome6: 32968594-32981505
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionChromatin regulator
Biological processHost-virus interaction, Transcription, Transcription regulation

Function

Chromatin reader protein that specifically recognizes and binds histone H4 acetylated at 'Lys-5' and 'Lys-12' (H4K5ac and H4K12ac, respectively), thereby controlling gene expression and remodeling chromatin structures. Recruits transcription factors and coactivators to target gene sites, and activates RNA polymerase II machinery for transcriptional elongation. Plays a key role in genome compartmentalization via its association with CTCF and cohesin: recruited to chromatin by CTCF and promotes formation of topologically associating domains (TADs) via its ability to bind acetylated histones, contributing to CTCF boundary formation and enhancer insulation. Also recognizes and binds acetylated non-histone proteins, such as STAT3. Involved in inflammatory response by regulating differentiation of naive CD4(+) T-cells into T- helper Th17: recognizes and binds STAT3 acetylated at 'Lys-87', promoting STAT3 recruitment to chromatin. In addition to acetylated lysines, also recognizes and binds lysine residues on histones that are both methylated and acetylated on the same side chain to form N6-acetyl-N6-methyllysine (Kacme), an epigenetic mark of active chromatin associated with increased transcriptional initiation. Specifically binds histone H4 acetyl-methylated at 'Lys-5' and 'Lys-12' (H4K5acme and H4K12acme, respectively).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.