SCUBA

CD4⁺ T cells: gene co-expression modules

Helper T lymphocytes recognising peptide on MHC class II; differentiate into Th1, Th17, Tfh, or regulatory subsets that orchestrate antibody production, phagocyte activation, and mucosal tolerance.

SCUBA's reference network for CD4⁺ T cells holds 149 gene modules covering 2,742 genes. Each module is a group of genes that rise and fall together across these cells, annotated with the biological process it most likely represents.

View the CD4⁺ T cells network in SCUBA

Anti-viral (5)

B cell help (4)

Cell contamination (1)

Cell cycle (1)

Cytoskeletal (3)

Cytotoxicity (4)

DNA/chromatin regulation (10)

Exhaustion (1)

Housekeeping (13)

Immune regulation (30)

Intercellular communication (2)

migration & adhesion (10)

Mitochondrial & OxPhos (10)

Protein processing & ER (9)

RNA processing (9)

Stress (5)

T cell development (7)

TCR/AP1/NFKb pathway (21)

Technical artifact (1)

Th17 fate (3)