SCUBA

SELENOK — Selenoprotein K

SELENOK belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SELENOK's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsPlasma cell secretory
B cell maturation
AARSD1, ATP1B3, BCAS2, CHMP1B, DNAJB9, ELL2, ETV3, IDI1 +9 moreView in SCUBA
CD4⁺ T cellsImmediate early activation
TCR/AP1/NFKb pathway
ALG13, AREG, BCAS2, C9orf72, CXCR4, FAM222A, HIP1R, NR4A2 +18 moreView in SCUBA
EndothelialInflammatory Lipid Metabolism
Metabolite transfer
ACSL4, APOL1, CDK2AP2, COPS8, GBE1, GOLM1, MAPRE1, NPC1 +5 moreView in SCUBA
Gamma-delta T cellsLate Activation Autophagy
Immune regulation
BCL3, BRD1, CREM, DUSP8, FAM177A1, FBXO33, FOSL2, GABARAPL1 +19 more
Goblet cellsERAD ER Homeostasis
Protein processing & ER
ARF4, ATP2A2, C1orf122, DNAJB9, HERPUD1, JTB, LARP1B, PGM3 +1 moreView in SCUBA
Innate lymphoid cellsNR4A Activation Response
activation
ALG13, ARL4A, BCAS2, CASP3, CHMP1B, CREM, DDX24, DLL1 +16 moreView in SCUBA
MacrophagesNF-κB Activation
Inflammatory
BCL3, BLOC1S6, CD83, CFLAR, CHMP1B, CNOT2, CSRNP1, CYLD +33 moreView in SCUBA
MonocytesNR4A Immediate-Early
Inflammatory
ANKRD37, CHMP1B, CKS2, CYCS, EIF4A3, ETV3, GLA, NR4A1 +4 moreView in SCUBA
Mucosal-associated invariant T cellER Stress UPR
Stress
DDIT3, DNAJB9, EIF4A1, GTF2B, HERPUD1, HNRNPA0, IDI1, LDHA +9 more
Natural Killer cellsNK Activation Response
activation
CREM, EIF1, FTH1, MAFF, NR4A2, SRGN, ZNF331View in SCUBA
Smooth muscle cellsATP Synthase Complex
Mitochondrial & OxPhos
ATP5F1A, ATP5F1B, ATP5F1D, ATP5F1E, ATP5MC1, ATP5MC2, ATP5MC3, ATP5ME +8 moreView in SCUBA

About the gene

SynonymsSELK
Chromosome3: 53884417-53891885
Predicted locationMembrane
Essential geneNo
Protein classPredicted membrane proteins
Biological processCalcium transport, Ion transport, Transport

Function

Required for Ca(2+) flux in immune cells and plays a role in T-cell proliferation and in T-cell and neutrophil migration (By similarity). Involved in endoplasmic reticulum-associated degradation (ERAD) of soluble glycosylated proteins. Required for palmitoylation and cell surface expression of CD36 and involved in macrophage uptake of low-density lipoprotein and in foam cell formation (By similarity). Together with ZDHHC6, required for palmitoylation of ITPR1 in immune cells, leading to regulate ITPR1 stability and function. Plays a role in protection of cells from ER stress- induced apoptosis. Protects cells from oxidative stress when overexpressed in cardiomyocytes.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.