SCUBA

TPM3 — Tropomyosin 3

TPM3 belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

TPM3's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsActin Cytoskeleton
Cytoskeletal
COTL1, GNAI2, HIGD2A, MOB1A, MPG, MYL12A, MYL12B, NDUFB5 +8 moreView in SCUBA
CD4⁺ T cellsCytoskeleton & metabolism
Cytoskeletal
ATP5F1D, ATP5MC3, ATP6V0E1, BRK1, CAP1, LCK, MYL6, NEDD8 +11 moreView in SCUBA
CD8⁺ T cellsRNA Processing Mixed
RNA processing & translation
AIP, CALM1, EZR, FUBP1, HNRNPA2B1, HNRNPH3, LCP1, LRRFIP1 +8 moreView in SCUBA
EndothelialHypoxia Response
Stress
C1orf122, CRELD2, CSTB, EFHD2, FKBP1A, HIF1A, LAPTM4B, NECTIN2 +3 moreView in SCUBA
EnterocytesIFN-gamma immunoproteasome
Inflammation
ABCC3, ACTR2, CARD16, CTSS, DMBT1, GOLM1, IQGAP1, PSMB8 +2 moreView in SCUBA
Gamma-delta T cellsmRNA Splicing
RNA processing & translation
ARHGDIA, DDX27, DDX59, EIF2AK1, EWSR1, FBXL5, GNL1, GTF2F1 +14 more
Goblet cellsMetabolic Stress Response
Mitochondrial & OxPhos
ATP6V0B, C11orf24, CHCHD2, COX17, LDHA, MRPL52, PRDX4, SRA1 +2 moreView in SCUBA
Innate lymphoid cellsAntigen Processing MHC-I
Immune regulation
CMTM6, GUK1, IL2RB, IL4R, MYL12A, PAXX, PSMA5, PSMB8 +8 moreView in SCUBA
MacrophagesActin Cytoskeleton Organization
Cytoskeletal
ACTR3, ARF1, ARHGDIA, ARPC4, CDC42, DERL1, EIF4G2, GARS1 +20 moreView in SCUBA
Smooth muscle cellsTGFB-Collagen Remodeling
ECM remodeling
COL14A1, IGFBP2, LASP1, SYTL2, TGFB3, VASN, VGLL3View in SCUBA

About the gene

SynonymsNEM1, TRK
Chromosome1: 154155308-154194648
Predicted locationIntracellular
Essential geneNo
Protein classCancer-related genes, Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionActin-binding, Muscle protein

Function

Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.