SCUBA

LRRFIP1 — LRR binding FLII interacting protein 1

LRRFIP1 belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

LRRFIP1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNFkB/MAPK activation
BCR/AP1/NFKb pathway
BIRC3, CCDC107, CD72, CHI3L2, CLEC2B, DENND4A, MAP3K8, MYADM +7 moreView in SCUBA
CD8⁺ T cellsRNA Processing Mixed
RNA processing & translation
AIP, CALM1, EZR, FUBP1, HNRNPA2B1, HNRNPH3, LCP1, MOB1A +8 moreView in SCUBA
EndothelialEC Quiescence Identity
Endothelial cell development
ABCC4, ARHGAP5, C1orf115, ENPP4, FAM107A, GIT2, IFNAR2, MSI2 +8 moreView in SCUBA
EnterocytesColonocyte terminal differentiation
Epithelial development
CCDC186, CEACAM1, CMPK1, FHL2, GCNT3, HKDC1, IFNGR1, PTP4A1 +2 moreView in SCUBA
Gamma-delta T cellsT Cell Exhaustion
Exhaustion
ACADVL, ACSS1, ADSS2, B4GALT3, CDK11A, CHP1, CNOT2, CNOT8 +20 more
Goblet cellsHypoxia Metabolic Stress
Stress
ADGRE5, ANKRD37, ARL4A, FBXO32, IRS2, KLF2, SKIL, TENT5AView in SCUBA
Hematopoietic progenitor cellsGlucocorticoid Response
Inflammatory
ARL4C, CYTH1, EMP1, ETS1, FOS, KLF6, PDE4B, PTPRC +4 more
Innate lymphoid cellsNK Homing Circulating
Homing & TEM
ADD3, ANXA1, APOBEC3G, C16orf54, C1orf162, CAPG, CASP4, CAST +37 moreView in SCUBA
MacrophagesER-Golgi Trafficking
Vesicular traficking
ADD1, AFTPH, AZIN1, COPA, DYNC1H1, HNRNPC, JOSD1, LCP2 +23 moreView in SCUBA
PericytesRAS Cytoskeletal Signaling
Cytoskeletal
ARPC5L, CNDP2, FAM177A1, KLF3, KRAS, PEA15, PTPN12, UBE2J1View in SCUBA
Smooth muscle cellsActin Cytoskeletal Scaffold
Cytoskeletal
ACTN4, ATP2B4, ATRX, DDX5, DLGAP4, EIF4G2, FAT1, GNAI2 +13 moreView in SCUBA

About the gene

SynonymsFLAP-1, FLIIAP1, GCF-2, GCF2, HUFI-1, TRIP
Chromosome2: 237627587-237813682
Predicted locationIntracellular
Essential geneNo
Protein classPlasma proteins, Predicted intracellular proteins, Transcription factors
Molecular functionDNA-binding, Repressor
Biological processTranscription, Transcription regulation

Function

Transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA. May control smooth muscle cells proliferation following artery injury through PDGFA repression. May also bind double-stranded RNA. Positively regulates Toll-like receptor (TLR) signaling in response to agonist probably by competing with the negative FLII regulator for MYD88-binding.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.