SCUBA

TSPO — Translocator protein

TSPO belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

TSPO's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsBCR Ras signaling
BCR/AP1/NFKb pathway
ANKRD28, CCL5, DOK3, GSTK1, GYPC, HOPX, HSH2D, ITGAM +12 moreView in SCUBA
CD4⁺ T cellsmRNA stability regulation
Immune regulation
APLP2, ARID5B, CARHSP1, GK, GLCCI1, GRAMD4, HIVEP1, METTL8 +12 moreView in SCUBA
EndothelialOxidative Stress Response
Stress
AHR, CD151, CD59, CTTNBP2NL, DSTN, FLOT2, GNB4, GNG5 +11 moreView in SCUBA
EnterocytesRedox Detoxification
Stress
CD9, CDX1, CYBA, GSTK1, GSTP1, KRT18, PYCARD, SEC61B +3 moreView in SCUBA
Gamma-delta T cellsEffector IFN Response
cytotoxicity
AGTRAP, ANXA1, B2M, CYBA, EMP3, FXYD5, GZMM, IFITM1 +9 more
Innate lymphoid cellsNK Homing Circulating
Homing & TEM
ADD3, ANXA1, APOBEC3G, C16orf54, C1orf162, CAPG, CASP4, CAST +37 moreView in SCUBA
MacrophagesInflammatory Monocyte Activation
Inflammatory
ACTN1, ADAM8, AGTRAP, ANXA2, ANXA4, C15orf48, CD44, CD9 +21 moreView in SCUBA
MonocytesGranulocytic Differentiation
Developmental
CSF3R, GLT1D1, HEBP2, NDUFB9, NRGN, PLP2, PNPLA2, PXN +2 moreView in SCUBA
Mucosal-associated invariant T cellCytotoxic Effector
cytotoxicity
ANXA4, CCM2, CD320, CST7, DYNLRB1, GZMM, LIMD2, MCUB +10 more
Natural Killer cellsMature NK Identity
Cytotoxicity
GMFG, IFITM2, KLF2, KLRD1, KLRF1, LYST, SAMD3, XBP1View in SCUBA
NeutrophilsActin Cytoskeleton Dynamics
Cytoskeletal
ACTB, ACTG1, ARPC5, CFL1, CORO1A, ITGB2, MYL6, PFN1 +6 more
PericytesMitochondrial OxPhos
Mitochondrial & OxPhos
ATP1B3, ATP5PF, CALM1, CAPZA2, COX17, COX5A, MRPL33, SRP14View in SCUBA
Smooth muscle cellsMyogenic Cytoskeletal Program
Contractility
CARHSP1, GADD45G, ITGB1BP1, MGST2, MYOZ1, NDUFV2, PDCL3, PGAM2 +3 moreView in SCUBA

About the gene

SynonymsBZRP, DBI, IBP, MBR, mDRC, PBR, pk18, PKBS, TSPO1
Chromosome22: 43151547-43163242
Predicted locationMembrane
Essential geneNo
Protein classCancer-related genes, FDA approved drug targets, Predicted membrane proteins
Molecular functionReceptor
Biological processLipid transport, Transport

Function

Can bind protoporphyrin IX and may play a role in the transport of porphyrins and heme (By similarity). Promotes the transport of cholesterol across mitochondrial membranes and may play a role in lipid metabolism, but its precise physiological role is controversial. It is apparently not required for steroid hormone biosynthesis. Was initially identified as peripheral- type benzodiazepine receptor; can also bind isoquinoline carboxamides.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.