SCUBA

VDAC1 — Voltage dependent anion channel 1

VDAC1 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

VDAC1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsGlycolysis OxPhos
Mitochondrial & OxPhos
ATP5F1B, ENO1, MDH2, NDUFB2, PARK7, PPA1, PRELID1, PSMA7 +1 moreView in SCUBA
CD4⁺ T cellsTNF activation survival
Immune regulation
BCL2L1, CD82, CFLAR, CMSS1, EPOP, IL21R, KCNN4, KDM2B +12 moreView in SCUBA
CD8⁺ T cellsCellular Housekeeping
Housekeeping
CDC123, CHCHD2, COX5A, MRPL52, NUDT5, PDIA6, PSMB6, PSMC1 +3 moreView in SCUBA
EndothelialER Protein Processing
Protein processing & ER
AP2S1, ATOX1, C1QBP, CCT3, DBI, ENO1, NHP2, OSTC +5 moreView in SCUBA
FibroblastsProteasome Assembly
Housekeeping
ATOX1, C1QBP, DBI, DYNLT1, MANF, MRPL52, NDUFV2, PDCD5 +4 moreView in SCUBA
Gamma-delta T cellsMitochondrial OxPhos
Mitochondrial & OxPhos
ADSL, AP1S1, CD151, COMTD1, COX5A, DDT, DNPH1, DUSP23 +20 more
Goblet cellsMucosal Innate Defense
Immune function
BOLA3, CTSS, DMBT1, ENO1, GPI, LGALS3BP, OLFM4, PIGR +4 moreView in SCUBA
Hematopoietic progenitor cellsChaperonin TRiC Complex
Housekeeping
ARL2, CCDC85B, CCT2, CCT3, CCT5, CCT6A, GADD45GIP1, NDUFS5 +4 more
Innate lymphoid cellsMitochondrial OxPhos
Mitochondrial & OxPhos
ATP5F1D, CAP1, MRPL51, NDUFB11, NOP10, PARK7, POLR2F, PSMB3View in SCUBA
Lymphatic endothelialProteasome Assembly
Protein processing & ER
ARPC2, CSTB, DEGS1, GSTO1, MRPL14, PDCD5, POMP, PRELID1 +5 moreView in SCUBA
MacrophagesGlycolytic Metabolism
Housekeeping
ARL1, ARPC5, ATP5PB, ATRAID, C4orf3, CALM1, CAPZA2, CHMP5 +30 moreView in SCUBA
Natural Killer cellsMetabolic Activation
Metabolism
FABP5, LDHA, NCL, NOP56, POMP, PTMA, SERBP1, SLC25A3 +2 moreView in SCUBA

About the gene

SynonymsMGC111064, PORIN
Chromosome5: 133971871-134004975
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionPorin
Biological processApoptosis, Host-virus interaction, Ion transport, Lipid transport, Transport

Function

Non-selective voltage-gated ion channel that mediates the transport of anions and cations through the mitochondrion outer membrane and plasma membrane. The channel at the outer mitochondrial membrane allows diffusion of small hydrophilic molecules; in the plasma membrane it is involved in cell volume regulation and apoptosis. It adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective. Binds various signaling molecules, including the sphingolipid ceramide, the phospholipid phosphatidylcholine, and the sterols cholesterol and oxysterol. In depolarized mitochondria, acts downstream of PRKN and PINK1 to promote mitophagy or prevent apoptosis; polyubiquitination by PRKN promotes mitophagy, while monoubiquitination by PRKN decreases mitochondrial calcium influx which ultimately inhibits apoptosis. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis. May mediate ATP export from cells. Part of a complex composed of HSPA9, ITPR1 and VDAC1 that regulates mitochondrial calcium-dependent apoptosis by facilitating calcium transport from the ER lumen to the mitochondria intermembrane space thus providing calcium for the downstream calcium channel MCU that directly releases it into mitochondria matrix (By similarity). Mediates cytochrome c efflux. Catalyzes the scrambling of phospholipids across the outer mitochondrial membrane; the mechanism is unrelated to channel activity and is capable of translocating both anionic and zwitterionic phospholipids

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.