SCUBA

HNRNPA1 — Heterogeneous nuclear ribonucleoprotein A1

HNRNPA1 belongs to a gene co-expression module in 14 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

HNRNPA1's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsRibosome biogenesis
Housekeeping
APEX1, APRT, C1QBP, CCDC59, IMPDH2, LBH, LDHA, LSM5 +17 moreView in SCUBA
CD8⁺ T cellsRNA Splicing & ER
RNA processing & translation
ARHGDIB, FKBP8, MIF, PFN1, PPDPF, PPP1R18, SNRPD2, TMED2 +2 moreView in SCUBA
EndothelialTranslation Elongation
RNA processing & translation
CCNI, COMMD6, EEF1A1, EEF1B2, EEF2, EIF3F, EIF3L, EIF4B +7 moreView in SCUBA
EnterocytesNucleolar RNA-binding
RNA processing & translation
HMGB1, HMGN2, HNRNPA2B1, HNRNPA3, HSP90AA1, HSP90AB1, NCL, NPM1 +2 moreView in SCUBA
FibroblastsTranslation Initiation
Housekeeping
CCNI, CD99, CNBP, EIF3E, EIF3F, ESD, ITM2B, LAPTM4A +3 moreView in SCUBA
Gamma-delta T cellshnRNP Splicing Complex
RNA processing & translation
ASXL1, DDX21, HNRNPC, HNRNPH3, HSPA9, NOP58, PABPC1, PAPOLA +5 more
Glial cellsRNA Translation Processing
RNA processing & translation
CYCS, EEF1B2, EEF1D, HNRNPH3, LDHA, NAP1L1, NPM1, PFDN5 +5 moreView in SCUBA
Hematopoietic progenitor cellsBiosynthetic Housekeeping
Housekeeping
BZW2, CHST12, CREG1, EEF1B2, FBL, HSP90AB1, IMPDH2, LDHB +7 more
Innate lymphoid cellsTranslation Initiation
RNA processing & translation
ATP5PO, CCNI, CDC42, CMPK1, COX4I1, COX7A2L, EIF3D, EIF3E +6 moreView in SCUBA
Lymphatic endothelialTranslation Elongation
RNA processing & translation
ANXA2, EEF1A1, EEF2, EIF1, FTH1, FTL, HNRNPA0, PTMA +2 moreView in SCUBA
MacrophagesTranslation Initiation
Housekeeping
AKR1B1, CAMLG, CAPZB, EEF1D, EEF2, EID1, EIF3D, EIF3E +26 moreView in SCUBA
Mucosal-associated invariant T cellHousekeeping Translation
Housekeeping
ARHGDIA, ARHGEF1, CCNI, DAZAP2, EEF2, HLA-A, HLA-B, PABPC1 +4 more
NeutrophilsTranslation Initiation
Housekeeping
EIF1AX, EIF3A, NAP1L1, NCL, PPIA, PTMA, RPN2, SET +1 more
Smooth muscle cellsBasal Maintenance Genes
Housekeeping
ANAPC16, C1QTNF2, C7orf50, CCNI, COX14, COX8A, MRPL33, PPP1CB +3 moreView in SCUBA

About the gene

SynonymsALS20, hnRNP-A1, HNRPA1
Chromosome12: 54280193-54287088
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionRibonucleoprotein, RNA-binding
Biological processHost-virus interaction, mRNA processing, mRNA splicing, mRNA transport, Transport

Function

Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and modulation of splice site selection. Plays a role in the splicing of pyruvate kinase PKM by binding repressively to sequences flanking PKM exon 9, inhibiting exon 9 inclusion and resulting in exon 10 inclusion and production of the PKM M2 isoform. Binds to the IRES and thereby inhibits the translation of the apoptosis protease activating factor APAF1. May bind to specific miRNA hairpins. (Microbial infection) May play a role in HCV RNA replication. (Microbial infection) Cleavage by Enterovirus 71 protease 3C results in increased translation of apoptosis protease activating factor APAF1, leading to apoptosis

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.