SCUBA

TPM4 — Tropomyosin 4

TPM4 belongs to a gene co-expression module in 16 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

TPM4's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsOxPhos & redox
Mitochondrial & OxPhos
ATOX1, CHCHD2, HNRNPR, KIF5B, MRPS21, NDUFAB1, NDUFB1, NDUFB2 +5 moreView in SCUBA
CD8⁺ T cellsMetabolic Housekeeping
Housekeeping
COX17, DAZAP1, EIF4E, ILF2, MRPL51, NDUFA2, SSNA1, TADA3View in SCUBA
EndothelialActin Cytoskeletal Remodeling
Cytoskeletal
ABCE1, ANXA2, CAMKK2, CORO1C, DBN1, EIF3J, MIF, PPP1R14B +3 moreView in SCUBA
EnterocytesDUOX2 oxidative defense
Antibacterial
CD55, CEACAM5, DUOX2, DUOXA2, ENSG00000267881, HK2, ITGA2View in SCUBA
FibroblastsInflammatory Fibroblast Activation
Inflammatory
ADAM9, CALU, CLMP, CNN3, GLIPR1, ITGAV, MCRIP1, NAP1L1 +5 moreView in SCUBA
Glial cellsER Stress Response
Stress
ANXA1, ARF4, CSNK1A1, HSPA5, KRT10, RAB32, RBM3, SERP1 +4 moreView in SCUBA
Goblet cellsActin Cytoskeletal Remodeling
Cytoskeletal
ACTN4, ACTR3, BHLHE40, CAP1, FHL2, KCNK1, LRP10, SDCBP +3 moreView in SCUBA
Innate lymphoid cellsCell Cycle Entry
Cell cycle
CCND2, EIF1B, ENY2, KMT2E, LUZP1, RAB8AView in SCUBA
Lymphatic endothelialCaveolae Cytoskeletal
Cytoskeletal
CALM1, CAVIN1, CRIP2, CTSZ, DYNLL1, EPHX1, GSTK1, HOXD8 +7 moreView in SCUBA
MacrophagesPhagocytic Endolysosomal
Lysosomal & pahgocytosis
ABHD2, ACTN4, AP3S1, ARF6, ATP6V1B2, CD151, CERS2, CNIH1 +27 moreView in SCUBA
MonocytesHypoxia Response
Tissue adaptation
ANPEP, ELL2, GNA15, HIF1A, NDRG1, RUNX1, SDC4, SLC7A5 +2 moreView in SCUBA
Mucosal-associated invariant T cellCytoskeletal Organization
Cytoskeletal
ARAP2, CHD8, CTNNB1, DYNC1H1, EP400, NFATC2, RASSF2, RNF4 +4 more
Natural Killer cellsNK Cytotoxic Activation
Cytotoxicity
CALR, CDK6, FASLG, P4HB, PDIA3, PPIB, SLAMF7, STARD3NL +1 moreView in SCUBA
NeutrophilsC5aR Complement Activation
Innate immunity
ADGRG3, C5AR1, CD55, ITPRIP, LAPTM5, MCL1, PFKFB3, PTPRE +3 more
PericytesFocal Adhesion Cytoskeleton
Cytoskeletal
ARPC5, CAVIN3, CNN3, MAP1B, MYL6, PDLIM2, TGFB1I1, TLN1View in SCUBA
Smooth muscle cellsActivated Myofibroblast
Activation
CNN3, EPHX1, IFI16, IGFBP4, LAPTM4B, NNMT, SERPING1, SSR4 +3 moreView in SCUBA

About the gene

Chromosome19: 16067021-16103002
Predicted locationIntracellular
Essential geneNo
Protein classCancer-related genes, Plasma proteins, Predicted intracellular proteins
Molecular functionActin-binding, Muscle protein

Function

Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments (By similarity). Binds calcium. Plays a role in platelet biogenesis.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.