SCUBA

SUB1 — SUB1 regulator of transcription

SUB1 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SUB1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsCytoskeleton/motility
migration & adhesion
ANXA2, ANXA4, BHLHE41, C4orf48, CAPG, CAPN2, CIB1, ISCU +11 moreView in SCUBA
CD4⁺ T cellsOxPhos & redox
Mitochondrial & OxPhos
ATOX1, CHCHD2, HNRNPR, KIF5B, MRPS21, NDUFAB1, NDUFB1, NDUFB2 +5 moreView in SCUBA
CD8⁺ T cellsIFN-gamma Stress Response
Inflammation
COX5B, FABP5, MT1E, MT2A, PHPT1, PSMB9, PSME2, VOPP1View in SCUBA
EndothelialActin Cytoskeletal Remodeling
Cytoskeletal
ACTB, ACTG1, ARF1, ARPC5L, CFL1, CYCS, DNAJB11, DNAJC1 +5 moreView in SCUBA
Gamma-delta T cellsAnabolic Activation Response
Housekeeping
ABHD5, ATF4, ATP6V0C, ATP6V1G1, BCL7B, BUD31, CALM2, CHRAC1 +26 more
Glial cellsMitochondrial Housekeeping
Mitochondrial & OxPhos
ATP5F1D, ATP6V1G1, COX7C, GNG5, RAN, SEM1, SH3BGRL3, ST3GAL4 +3 moreView in SCUBA
Innate lymphoid cellsMitochondrial Housekeeping
Mitochondrial & OxPhos
COX7A2, COX7B, EEF1B2, EIF1AX, FTH1, HNRNPC, ID2, NAP1L1 +8 moreView in SCUBA
Lymphatic endothelialRNA Protein Homeostasis
RNA processing & translation
ADRM1, BAG1, COPRS, ILF2, RAB32, RAN, RBM8A, SLC25A5 +2 moreView in SCUBA
MacrophagesMixed Housekeeping
Housekeeping
AP2M1, BAG1, CHMP4A, CISD2, COA6, CSNK2B, CYB5R3, DEGS1 +20 moreView in SCUBA
Mucosal-associated invariant T cellER Stress UPR
Stress
DDIT3, DNAJB9, EIF4A1, GTF2B, HERPUD1, HNRNPA0, IDI1, LDHA +9 more
Natural Killer cellsMetabolic Activation
Metabolism
FABP5, LDHA, NCL, NOP56, POMP, PTMA, SERBP1, SLC25A3 +2 moreView in SCUBA
Smooth muscle cellsTranslocon & Proteostasis
Housekeeping
ATP6V0E1, CLTA, EIF3F, NOP10, NPC2, PSMA1, SEC61G, ST13 +2 moreView in SCUBA

About the gene

Synonymsp14, p15, PC4
Chromosome5: 32531633-32604079
Predicted locationIntracellular
Essential geneNo
Protein classPlasma proteins, Predicted intracellular proteins
Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Function

General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. May be involved in stabilizing the multiprotein transcription complex. Binds single-stranded DNA. Also binds, in vitro, non-specifically to double-stranded DNA (ds DNA).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.