SCUBA

S100A4 — S100 calcium binding protein A4

S100A4 belongs to a gene co-expression module in 15 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

S100A4's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsCytoskeleton/motility
migration & adhesion
ANXA2, ANXA4, BHLHE41, C4orf48, CAPG, CAPN2, CIB1, ISCU +11 moreView in SCUBA
CD4⁺ T cellsCell motility/adhesion
migration & adhesion
ANXA2, CCDC107, CYBA, FAM50A, GLIPR2, GRAP2, GYG1, ITM2B +14 moreView in SCUBA
CD8⁺ T cellsGut Tissue Residency
Gut residence
ALOX5AP, C4orf3, CAPN2, CD164, CD3D, CD7, CD99, CLIC3 +9 moreView in SCUBA
EndothelialEC Inflammatory Activation
Inflammation
ARHGAP4, ARHGEF2, ARL15, ATP13A3, CAPZA2, CD58, GFOD1, GJA4 +12 moreView in SCUBA
FibroblastsElastin-Fibronectin ECM
ECM production
ABI3BP, DDAH2, ELN, FN1, LRIG3, SERPINE2, SOD3, SSC5DView in SCUBA
Gamma-delta T cellsEffector IFN Response
cytotoxicity
AGTRAP, ANXA1, B2M, CYBA, EMP3, FXYD5, GZMM, IFITM1 +9 more
Glial cellsS100 Glial Activation
Activation
CDC42EP5, CREB5, CRIP2, EMP3, S100A10, S100A6, TPPP3View in SCUBA
Hematopoietic progenitor cellsER Protein Folding
Housekeeping
ASRGL1, CALR, CD63, CHPT1, EMP3, GLUL, HSPA5, IDH2 +13 more
Innate lymphoid cellsProtein Biogenesis & Import
Protein processing & ER
ANAPC16, ATP6AP2, CD164, COMMD6, EEF1D, KLRB1, NACA, PFDN5 +6 moreView in SCUBA
MacrophagesInflammatory Monocyte Activation
Inflammatory
ACTN1, ADAM8, AGTRAP, ANXA2, ANXA4, C15orf48, CD44, CD9 +21 moreView in SCUBA
Mucosal-associated invariant T cellTranslation Elongation
RNA processing & translation
BAX, BTF3, COX4I1, EEF1B2, EEF1D, EIF3K, FAU, FTL +8 more
Natural Killer cellsGranulysin Cytotoxic Effector
Cytotoxicity
ARL4C, DSTN, EMP3, FLNA, GNLY, S100A6, TIMP1, VCLView in SCUBA
NeutrophilsS100 Alarmin Response
Inflammatory
CD177, H2AC6, METTL9, MS4A6A, RBP7, S100A12, S100A6, SH3BGRL3
PericytesSmooth Muscle Contractile
Cytoskeletal
ACTA2, CSRP1, FLNA, MYL9, MYLK, NEXN, PPP1R14A, TAGLN +2 moreView in SCUBA
Smooth muscle cellsMHC-I antigen presentation
Inflammation
B2M, HLA-A, HLA-B, HLA-C, IFI27, NDUFA4, S100A6, TMSB4X +2 moreView in SCUBA

About the gene

Synonyms18A2, 42A, CAPL, FSP1, MTS1, P9KA, PEL98
Chromosome1: 153543613-153550136
Predicted locationIntracellular, Secreted
Essential geneNo
Protein classCancer-related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins

Function

Calcium-binding protein that plays a role in various cellular processes including motility, angiogenesis, cell differentiation, apoptosis, and autophagy. Increases cell motility and invasiveness by interacting with non-muscle myosin heavy chain (NMMHC) IIA/MYH9. Mechanistically, promotes filament depolymerization and increases the amount of soluble myosin-IIA, resulting in the formation of stable protrusions facilitating chemotaxis (By similarity). Also modulates the pro-apoptotic function of TP53 by binding to its C-terminal transactivation domain within the nucleus and reducing its protein levels. Within the extracellular space, stimulates cytokine production including granulocyte colony- stimulating factor and CCL24 from T-lymphocytes (By similarity). In addition, stimulates T-lymphocyte chemotaxis by acting as a chemoattractant complex with PGLYRP1 that promotes lymphocyte migration via CCR5 and CXCR3 receptors.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.